Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01607 ATGGGTTCGGGGTCGGATTCGAATGGATGGAACCGTGCCAGAGGGTTGGCTGTTAAGACTCTGCTACTCATTGGTGGCGCACTTCTTGTCAAGCGACTCCGCAAGTCCACCACGCGCTGGGACCATGCTCATTTCGTCTCTAAGGCCCTCACCGGCCAAAAGTATTCAAAGGACCAAGCTTCCAGAGACCCTGATAACTATTTCAATATTAGGATGCTTACGTGCCCCGCCGCAGAGCTAGTGGATGGTTCCAAGGTGTTGTATTTTGAACAGGCTTTTTGGAGGAGTCCACAAAAGCCCTTTCGGCAGAGGTTTTTTATGGTGAAACCTTGTCCGAAAGAGTTGAAATGTGACGTTGAGTTAAGTGCATACGCCATTAGAGACATGGAGGAGTACAAAAATTTCTGTGATCGGCCAAGGGATCAGCGTCCACAGCCAGAAGAAGTCATCGGGGATATTGCAGAACATTTGACAACAGTACATCTTAAGCGTTGTTCACGCGGAAAACGTTGCTTATATGAAGGTTCAACCCCACCTGGTGGATTTCCTAATTCATGGAATGGAGCAAGCTACTGTACTTCAGAACTTGCAATTATGAAGAGCAACGAGATACACACCTGGGATAGGGGTTATGATGACGATGGAAATCAAGTCTGGGGACAGAAAGAAGGCCCTTATGAGTTTAAGCCTGCACCAACCTCCAGTTTTAATGATATGTTTTCTCCCTTCAACTTCCCCCCTCCACCGTCCATGGAAAGAAGAATAGAGGGCTCATTTGTTTTGCAAGAATGA 792 0.471 MGSGSDSNGWNRARGLAVKTLLLIGGALLVKRLRKSTTRWDHAHFVSKALTGQKYSKDQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFFMVKPCPKELKCDVELSAYAIRDMEEYKNFCDRPRDQRPQPEEVIGDIAEHLTTVHLKRCSRGKRCLYEGSTPPGGFPNSWNGASYCTSELAIMKSNEIHTWDRGYDDDGNQVWGQKEGPYEFKPAPTSSFNDMFSPFNFPPPPSMERRIEGSFVLQE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01607 263 Pfam CpeT/CpcT family (DUF1001) 46 229 IPR010404 GO:0016829|GO:0017009
Viun9g01607 263 CDD CpcT 46 231 IPR010404 GO:0016829|GO:0017009
Viun9g01607 263 Gene3D CpcT/CpeT domain 42 238 IPR038672 -
Viun9g01607 263 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 3 263 IPR010404 GO:0016829|GO:0017009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01607 Viun-Chr9 23911225 23915031 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01607 - - ccaj:109806559 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01607 9 23911225 23915031 Viun9g01607 9 23911225 23915031 ECH