Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01605 ATGGCCATGCACCTGCAGCCATCCACAATAACCCTTAACACTGCAAGGTCCCCTCCTTCATTAGCCCCAACACTCAATGCTGGCTTGCGACCACAGTTCAACCCTTTAGCTTTGAAGTCGTCTTTCTTCTCTGGTCCCCTTAACCTCTTGTTTCATCCAAAACAACAACGTGTAACTTCTCCAGCTCCCAGGATTTCCATGCGTGTGGCTTCCAAGCAAGCTTATATCTGTCGTGATTGCGGGTATATTTACAATGAGAGGACACCCTTTGAGAAATTACCCGATAAATTCTTCTGTCCGGTTTGTGGTGCTCCAAAAAAAAGGTTTAGGCCCTACGCTCCAGCTGTTGCAAGAAACGCAAATGATACAGATGTAAGAAAGGCAAGGAAATCCGACATCCAGAAAGAAGAAGCAACTGGGAAGGCACTTCCAATTGCAGCTGCTGTGGGAATTGCAGTGCTTGCAGGATTATACTTCTATCTGAACAACACGTTTTAG 498 0.4598 MAMHLQPSTITLNTARSPPSLAPTLNAGLRPQFNPLALKSSFFSGPLNLLFHPKQQRVTSPAPRISMRVASKQAYICRDCGYIYNERTPFEKLPDKFFCPVCGAPKKRFRPYAPAVARNANDTDVRKARKSDIQKEEATGKALPIAAAVGIAVLAGLYFYLNNTF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01605 165 Pfam Rubredoxin 75 109 IPR024935 GO:0005506
Viun9g01605 165 ProSiteProfiles Rubredoxin-like domain profile. 72 112 IPR024934 GO:0005506
Viun9g01605 165 CDD rubredoxin 75 112 IPR024935 GO:0005506
Viun9g01605 165 SUPERFAMILY Rubredoxin-like 72 117 - -
Viun9g01605 165 Gene3D - 72 112 - -
Viun9g01605 165 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 14 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01605 Viun-Chr9 23910157 23911268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01605 - - gmx:100500575 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01605 9 23910157 23911268 Viun9g01605 9 23910157 23911268 ECH
Viun3g00815 3 5036603 5037603 Viun9g01605 9 23910157 23911268 PCT
Viun3g00710 3 4384572 4386579 Viun9g01605 9 23910157 23911268 PCT