Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01478 ATGGCACCGAGTGATCTCCGCCGTCCGTTCAAGCGACCGCCGATTTCCGATCAAGAGAAGCGCAGGGCACAGTCTCTGCTCCGCCAGGCACAGAATCGCCAAGACGCCCAGCGCCATGCGCGTTTCTTAGTCACCACCGTCCTCACTCTCCCCTTCCAATCCTACGTACCAGAATCCCAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAACTCGAACTGGAGCTTACCGAAGGCGTTTCCTCTTCCGGCTCGAACGTGCTCGAGAACCTCGACGTCCTCGGAGCCTCGAAGCTGAAGGCAGCGGAAGCTCGCAAGTGGTTCGCGAAGCAGCTCATGCTCCCCGAGTGGATGATCGACGTTCCTAACAACCTCGCCCAAGACTGGTTCGTCTTCGCTCGCCCTTCCGGAAAACGGTGTTTTGTCGTTTCGTATAACGGAACGACGATTAGCCGTCTGCGTAACGGTTCCATTCTGAATCGGTTTCCCTCCGCGCTGCCCAGTGGCGCCAGGAAAAAGGATTCCGGTTCCTCTCAGTCTTACTCTATATTGGATTGCATCTTTCACGAGCTGGATCAGACCTATTACGTTATTGACATGGTTTGTTGGAGGGGTTACTCTCTGTCCGATTGCACTGCGGAGTTTAGGTTCTTCTGGTTGAATTCCAAGCTTGCAGAAAGTGGTGCTTGTGAACCTCCTTCTTATTATCACAAGTATAGGTTCAGTTTGGTTCCGGTGTATGGTTGTGACTCGAATGGTCTTCAAGCTGCTTATTCGGCACCGGTGCCTTATGTCAAAGATGGTCTTCTTTTTTACAACAAGCATGCTCATTATCAGGCAGGAATTACGCCATTAGCATTAGTTTGGAAGGATGAAAACTGTAGTCAATATGTTATGGACACGGACAGTAAAGGACAGGTTCCGAACCAACAGCAGGTGGTTTTGGAGCTTCAAGAAGATGGAAAACTAACCACTTCGGACGATCCTCCTATCGTATTTGGCTGTTTGGATGGAAGCTTTATACAACAGTCAGGGCTGCATTCAGGATGCCTTGTACGGTTTTCAATTGGGGAGGGAGGATTGATTTTGATGGATGGGAAGCTTGAGAAAGCTGATCTACATTATCTTGGGAAGGCCAACCGAGCTCGTGGTTCCGCTGATAGTTTCTCTAAGGTTATGTTCCAATACGGTATTCGACACACCCCCTTAAAAATTGATGTTTTGTTGGAATCTGTCAGCTTACCAGTTGTTCAAGAAAGCACAGCTTGTGATGTTGAGATGGATGGTTGA 1299 0.4996 MAPSDLRRPFKRPPISDQEKRRAQSLLRQAQNRQDAQRHARFLVTTVLTLPFQSYVPESQPEPEPEPEPEPEPELELELTEGVSSSGSNVLENLDVLGASKLKAAEARKWFAKQLMLPEWMIDVPNNLAQDWFVFARPSGKRCFVVSYNGTTISRLRNGSILNRFPSALPSGARKKDSGSSQSYSILDCIFHELDQTYYVIDMVCWRGYSLSDCTAEFRFFWLNSKLAESGACEPPSYYHKYRFSLVPVYGCDSNGLQAAYSAPVPYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLELQEDGKLTTSDDPPIVFGCLDGSFIQQSGLHSGCLVRFSIGEGGLILMDGKLEKADLHYLGKANRARGSADSFSKVMFQYGIRHTPLKIDVLLESVSLPVVQESTACDVEMDG 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01478 432 Gene3D DNA ligase/mRNA capping enzyme 4 320 - -
Viun9g01478 432 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 431 IPR017336 GO:0005634|GO:0005737|GO:0061015
Viun9g01478 432 MobiDBLite consensus disorder prediction 63 77 - -
Viun9g01478 432 MobiDBLite consensus disorder prediction 1 38 - -
Viun9g01478 432 MobiDBLite consensus disorder prediction 56 84 - -
Viun9g01478 432 CDD Snurportin-1_C 110 295 - -
Viun9g01478 432 MobiDBLite consensus disorder prediction 10 26 - -
Viun9g01478 432 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 110 293 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01478 K13151 - gmx:100801927 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01478 9 17691010 17697916 Viun9g01478 9 17691010 17697916 ECH