Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01444 ATGGCACCTACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCCAGAAAGTACTCTCATTCACAGAATATGGGGAAGTCTAGGAAATATTCCAAAGCTTATGCTACTGGTTTTGTTCCCGATTTTCGGCATGCTGTTGAGACTATGGGTGAATCAGAAGGGTTGGGCAGCTTGGGAAGGGTTGATACGGAGCTTACGGCATCAGCAGATTCTTGTGCACCAAAGAGGAAATGCCCTGGTTTGAGCACGGGTGGTTATGGTAGTTTTGATGTACCTTTTCAACTTTTCTCTTTGTCAAGGATGTCGGGTTTTGAGAGAAAGGATTTGAAAACAAGGTTGACATGGGAACTTGAACAAGTAAAGGAATTTCAGAAGAAAGTTGAAGCTATGAACTCAAATGCTCTAGTGTTATCACCCTCCAGTGACATTAGGAGCTGCAGTGCAGGGCAGAAGAGGCCTAAGTTGGAGAGCCAGCATTTGGCAATGGAAGTATCGGTGCCACATGGTAAGAAAAGGCCCTTACCTGGAAATAGTGGTCCCAGGACAAAGAAAAGTATATCTGGACGTCCTGAACTTCCCAAACCTGCTGCGCCAGTGGCCTCACATGCTGCGATGATGAAACCGTGTGAGGCATTACTTAACCGATTGATGACTCATCAATTTGGTTGGGTTTTCAACACACCTGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCACTGTCATCAAACATCCAATGGATTTGGGTACTGTGAAGAGGAGAATAACCTCTGGTGAATACACTAATCTCTTGGATTTTGCTGCTGATGTGCGACTGACTTTCTCAAATGCAATGACATATAATCCACCTGGCAATGATGTACACGTCATGGCTGATACCCTTAATAAAATGTTTGAATCGAGATGGAAGGCGATAGAAAAAAAAATTCCTGTTATTGACTGTGTCCCGTCTGAGCCTTCTAGACCTACTCGTGTGGAAACAGAAATTTCTGATCGAGTTCCTCCCTCAAAAAAGAAGAAAATAACATCAAATAGTGTCAAGCCTGAGCCTCTTAAAAAAATCATGAGTGTAGAGGAGAAGCATAAATTGAGTGTAGAGTTGGAGGCCATGCTTGGAGAGCTTCCTGATGCTATTGTTGATTTCTTGAGAGAGCAAAGTTATAATGCAGGGCAAACCAATGATGAGGAAATTGAAATTGATATTGATGCTCTTAGTGATGACACCCTGTTCAAACTGCGGAAGCTTCTGGATGATTATTTGCTGGAGAAGCAAAGATCTCAGACAAAAGCTGGACAATGTGAATTGGAGCTCCTGAATGAATCAGGGTTCAGTAATTCACCGGTGCAGCCTTGCAAAGTCAATGAACAAGTTGAGGAGGACGTGGACATTGTTGGTGGTAATGATCCTCCTATTTCAACTTATCCTCCATTAGAGATCGACAAAGATGGTACCAATAGAAACAGTAAATGCACCAGTTCAAGCAGTTCTAGTAGTGAATCTGGCACTTCATCCAGTGATTCAGACTCGGGTAGTTCATCTGGAAGTGAGTTGGATATAGCTAAAACATCAGAACCTCTTAGTGGTACCAAGGAAAATGTAGGTTCTGGCTTGACTTTAGATCAAAACAAAGGGGATCCTGGTAATTCAGAAACTGGAAAGGATTCGACGAATGTTGGTGGCCAAGTTGAGCAGACTTCCCAGAGTAAGCTTGTTGCTTCTGAATCAGAAAGCCATCAAGAGGGGGAGAGTGCTGCATCTAAGAGGCAAGTCTCTCCCGAAAAGCTCTATCGTGCAGCTTTATTAAGGAGCCGTTTTGCTGACACCATTCTTAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAAAAGCGGGATCCTGAAAAACTTAGGTTGGAGCGAGAAGAACTTGAAAGGCGACAGAAAGAAGAGAAAGCACGGTTACAGGCAGAGGCAAAGGCTGCAGAAGAAGCTCGGAGGAAGGCTGAAGCAGAAGCTGCAGCTGAAGCCAAAAGGAAAAGGGAGCTGGAAAGAGAAGCAGCCCGTCAAGCTTTGCAAAAGATGGAGAAAACTGTCGATATAAACGAGAGCAGTCAATTTTTGGAAGATCTTGAGATGCTGAGTGCTGTACATGACGAACCTATGCCAAGTTTTAAAGAGGAGACAAGCGCAGATCTACCTCAAAATGGATTGGGTAGGATCAACCTACAGGGGAATCCCTTAGAACAGCTAGGTTTGTATATGAAGGATGATGAGGAGGAGGAAGAGGAGGAACTGCCTGTGAGTGGTGCTGCTGGACCATTAAATGATGTGGAAGAAGGAGAAATTGACTGA 2331 0.4363 MAPTVPIEFAGQKESRKYSHSQNMGKSRKYSKAYATGFVPDFRHAVETMGESEGLGSLGRVDTELTASADSCAPKRKCPGLSTGGYGSFDVPFQLFSLSRMSGFERKDLKTRLTWELEQVKEFQKKVEAMNSNALVLSPSSDIRSCSAGQKRPKLESQHLAMEVSVPHGKKRPLPGNSGPRTKKSISGRPELPKPAAPVASHAAMMKPCEALLNRLMTHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKRRITSGEYTNLLDFAADVRLTFSNAMTYNPPGNDVHVMADTLNKMFESRWKAIEKKIPVIDCVPSEPSRPTRVETEISDRVPPSKKKKITSNSVKPEPLKKIMSVEEKHKLSVELEAMLGELPDAIVDFLREQSYNAGQTNDEEIEIDIDALSDDTLFKLRKLLDDYLLEKQRSQTKAGQCELELLNESGFSNSPVQPCKVNEQVEEDVDIVGGNDPPISTYPPLEIDKDGTNRNSKCTSSSSSSSESGTSSSDSDSGSSSGSELDIAKTSEPLSGTKENVGSGLTLDQNKGDPGNSETGKDSTNVGGQVEQTSQSKLVASESESHQEGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRLEREELERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINESSQFLEDLEMLSAVHDEPMPSFKEETSADLPQNGLGRINLQGNPLEQLGLYMKDDEEEEEEELPVSGAAGPLNDVEEGEID 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01444 776 SUPERFAMILY Bromodomain 180 312 IPR036427 GO:0005515
Viun9g01444 776 MobiDBLite consensus disorder prediction 325 345 - -
Viun9g01444 776 MobiDBLite consensus disorder prediction 721 735 - -
Viun9g01444 776 SMART bromo_6 198 308 IPR001487 GO:0005515
Viun9g01444 776 Coils Coil 631 690 - -
Viun9g01444 776 MobiDBLite consensus disorder prediction 164 196 - -
Viun9g01444 776 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Viun9g01444 776 ProSiteProfiles NET domain profile. 346 428 IPR027353 -
Viun9g01444 776 MobiDBLite consensus disorder prediction 1 27 - -
Viun9g01444 776 Pfam Bromodomain extra-terminal - transcription regulation 356 418 IPR027353 -
Viun9g01444 776 MobiDBLite consensus disorder prediction 321 345 - -
Viun9g01444 776 PANTHER TRANSCRIPTION FACTOR GTE8 185 760 - -
Viun9g01444 776 Gene3D - 350 428 IPR038336 -
Viun9g01444 776 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Viun9g01444 776 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Viun9g01444 776 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Viun9g01444 776 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Viun9g01444 776 MobiDBLite consensus disorder prediction 487 580 - -
Viun9g01444 776 Pfam Bromodomain 209 293 IPR001487 GO:0005515
Viun9g01444 776 Gene3D - 195 313 IPR036427 GO:0005515
Viun9g01444 776 MobiDBLite consensus disorder prediction 463 594 - -
Viun9g01444 776 MobiDBLite consensus disorder prediction 714 776 - -
Viun9g01444 776 CDD Bromo_plant1 205 303 IPR037377 -
Viun9g01444 776 MobiDBLite consensus disorder prediction 616 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01444 Viun-Chr9 16422784 16427623 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01444 - - gmx:100776368 1149.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01444 9 16422784 16427623 Viun9g01444 9 16422784 16427623 ECH