Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01432 ATGCTCACTCCCCTAATGCTGCTGAAATCATCTTTCACTCCCATTTTCCTGGTGCAAACCGCTAAATCCAAACCTCAAAAACTTCTCCACCACGCATTCACCAAAACCTTCTTCACTTACAGCACGCCACCCGTTCGACACAATGCCTGTCTCAACCTCTCCACCCCACCACCCGCTTCCTCCGCCTATATCCACCTCCCTTTCTGCCGGAAACGCTGCCACTATTGCGACTTCCCCGTCGTAGCTCTCGGCTCCGCCTCCACCCAAACCCACCACGACCCGCGCGTCTCCAACTACATTCACTGGCTCTGCCGGGAAATCACTGCCACCAAAGTGGATCAACCCGCTTCCACAACGCCCCTCCAGACTGTCTACTTTGGTGGTGGAACACCCTCGCTGGTGCCTCCTGCGATGGTTTCATCCGTTTTAGAGACTCTGAGGGTGAAGTTTGGGCTTTGTGAGGACGCGGAAATATCGATGGAGATGGACCCCGGCACGTTTGATGCAGAGAAGATGAGGGAGATGGTGGCGTTAGGAGTGAATAGAGTGTCTTTGGGAGTTCAGGCGTTTCAGGAGGAGCTGTTGAGATCGTGTGGGAGGGCACATGGGGTGCAAGAGGTTCATGAGGCTATTAGTGTTGTGAAGTCATGTGGGGTTGAGAATTGGAGCATTGATCTCATAGCCTCGTTGCCTCATCAGAGTTGGGAGATGTGGGAGGAAAGTTTAAGGCTCACCATTGAGTCACAACCTTCTCATGTGTCCGTTTATGACTTGCAAATTGAGCAAGGAACAAAATTTGGACGATTGTACTCACCAGGGGAATTTCCGATGCCTTCTGAAACACAATCGGCTGAGTTCTATAAGATGGCTTCAAGAATGCTTTCTGATGCGAATTACAACCATTATGAAATCAGCAGCTACTGCAAAAGTGGAATCTGGAAAATGGATTAG 951 0.5058 MLTPLMLLKSSFTPIFLVQTAKSKPQKLLHHAFTKTFFTYSTPPVRHNACLNLSTPPPASSAYIHLPFCRKRCHYCDFPVVALGSASTQTHHDPRVSNYIHWLCREITATKVDQPASTTPLQTVYFGGGTPSLVPPAMVSSVLETLRVKFGLCEDAEISMEMDPGTFDAEKMREMVALGVNRVSLGVQAFQEELLRSCGRAHGVQEVHEAISVVKSCGVENWSIDLIASLPHQSWEMWEESLRLTIESQPSHVSVYDLQIEQGTKFGRLYSPGEFPMPSETQSAEFYKMASRMLSDANYNHYEISSYCKSGIWKMD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01432 316 SMART MiaB 59 289 IPR006638 GO:0003824|GO:0051536
Viun9g01432 316 SUPERFAMILY Radical SAM enzymes 53 310 - -
Viun9g01432 316 SFLD HemN-like, clustered with heat shock genes 60 311 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Viun9g01432 316 PANTHER COPROPORPHYRINIGEN III OXIDASE 53 311 IPR034505 -
Viun9g01432 316 Gene3D tm_1862 like domain 67 297 IPR023404 -
Viun9g01432 316 ProSiteProfiles Radical SAM core domain profile. 54 297 IPR007197 GO:0003824|GO:0051536
Viun9g01432 316 CDD Radical_SAM 69 280 - -
Viun9g01432 316 SFLD anaerobic coproporphyrinogen-III oxidase like 60 311 - -
Viun9g01432 316 Pfam Radical SAM superfamily 64 244 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01432 Viun-Chr9 15936888 15938906 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01432 - - gmx:100779022 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01432 9 15936888 15938906 Viun9g01432 9 15936888 15938906 ECH