Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01411 ATGAAACGGTTTTTCAAAGTAGTGGAAAAAGATTCAGATGGGTCTGCGAAGAAGCCAAGAGAGAGTGAGAATGATGCCGAAAATGAAGAGAACAACAAGAAGAAGGAACCGTTGAAGTTTATGACATGGAATGCCAACAGTTTTCTTCTTCGGGTCAAAAACAACTGGCCCGACTTCACCAAGCTCATCACCACTTTTGATCCTGATGTCATTGCCATTCAGGAAGTTCGGATGCCTGCTGCAGGAGCAAAGGGTGCATCTAAAGTTCCGGGGGAAATAAAAGATGATACAAACGCAGCCAGGGAAGAAAAGAAGGTATTGATGCGTGCACTCTCTGCTCCACCTTTTGGCAACTATCATGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACAGCAGTACTTGTGAAAAAATGCTTGAAGCCAAAAAGTGTTGTTTTCAATCTTGATAAATTAGCCTCAAAACATGAACCAGATGGTCGAGTGATCCTAGTTGAATTTGAAACACTCCGTTTATTGAATACATATGTACCAAACAACGGATGGAAAGAGGAGCCAAACTCGTTTCAAAGGAGAAGAAAATGGGACAAAAGGATTCTTGAATTCGTTACACAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATTGACGTAAGTCATCCCGAGTTTTTCAGTACAGCAAAACTCAATGGTTATATCCCTCCAAATGAAGAGGATTGTGGTCAACCTGGGTTTACCTTGGCTGAAAGAAGACGATTTGGTACCATCTTAAGAGAGGGAAAGCTGGTGGATGCTTACAGATTTTTGCATAAGGATAAGGACATGGAGCGAGGTTTCTCATGGTCTGGAAATCCAGTCGGAAGGTATCGTGGAAAACGGATGAGAATAGACTATTTTTTAGTTTCAGAGAAACTCAAAGAAAGGATTGTTGCATGTGAAATACATGGACATGGGATAGAGTTAGAAGGTTTCTATGGAAGTGATCATTGTCCCGTTACCTTAGAGCTCTCTCCTAGTTCTGATCCTCAAAATGAGGATGCAATATAA 1074 0.4143 MKRFFKVVEKDSDGSAKKPRESENDAENEENNKKKEPLKFMTWNANSFLLRVKNNWPDFTKLITTFDPDVIAIQEVRMPAAGAKGASKVPGEIKDDTNAAREEKKVLMRALSAPPFGNYHVWWSLADSKYAGTAVLVKKCLKPKSVVFNLDKLASKHEPDGRVILVEFETLRLLNTYVPNNGWKEEPNSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSTAKLNGYIPPNEEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHKDKDMERGFSWSGNPVGRYRGKRMRIDYFLVSEKLKERIVACEIHGHGIELEGFYGSDHCPVTLELSPSSDPQNEDAI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01411 357 Pfam Endonuclease/Exonuclease/phosphatase family 41 338 IPR005135 GO:0003824
Viun9g01411 357 NCBIfam exodeoxyribonuclease III 38 345 IPR004808 GO:0004518|GO:0006281
Viun9g01411 357 CDD Ape1-like_AP-endo 38 345 - -
Viun9g01411 357 SUPERFAMILY DNase I-like 38 345 IPR036691 -
Viun9g01411 357 ProSiteProfiles AP endonucleases family 1 profile. 38 347 IPR004808 GO:0004518|GO:0006281
Viun9g01411 357 PANTHER AP ENDONUCLEASE 25 346 IPR004808 GO:0004518|GO:0006281
Viun9g01411 357 MobiDBLite consensus disorder prediction 1 35 - -
Viun9g01411 357 FunFam DNA-(apurinic or apyrimidinic site) lyase 10 347 - -
Viun9g01411 357 Gene3D Endonuclease/exonuclease/phosphatase 4 347 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01411 - - gmx:100817167 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01411 9 15327929 15334059 Viun9g01411 9 15327929 15334059 ECH