Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01410 ATGGCAGGTACAAGTAGCATAATCTCCATCTCCTCTGCTTCACTCTTCACTCCAACAACACCTCAACCAAAAACCCATTGCCTCCTCAAACACACCAAGGACAATGATCATCTTCCACCATCATCCTTCACTACTCTTTCTTCTCTTAGGATATCAAAACCAAAAACAACCACAAGGGTGAATGTTCCTCCTCGTACTCGTAGGTGGAGTTGTTCAGCCTCTGCATCTTCCTCTTCCACTCTTCCCTCGGCTCTTCTATTTGACTGTGATGGAGTCCTTGTAGATACCGAGAAAGATGGTCACCGCATTTCTTTCAACCAAACCTTCCAAGAGAGAAATCTGGGCGTTACATGGGATGTGGACTTGTATGGAGAATTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACAGCATACTTTAACAAGACAGGTTGGCCTGCAAATGCCCCAGCAGGTGAACAAGAAAGAAAAGAATTCGTAGCTTCACTTCACAAACAAAAGACAGAACTATTCATGGCTCTTATTGAGAAAAAACTCTTGCCTCTTCGTCCAGGTGTTGCAAAGATTATCGATCAGGCTTTTGCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAATGAAAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGACCCGAGAGAGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGTAAAAAGCCTGATCCTGCCATCTATCTGTTAGCAGCCAGCACTCTGGGTGTTGAACCTTCAAGATGTGTTGTTGTGGAGGACAGTGCCATAGGCCTTGCAGCTGCTAAAGCAGCTGGAATGACGTGTATAGTAACAAAGAGTGGCTACACAGAAGATGAAGATTTCTTAAATGCAGATGCAGTGTTTGACTGCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGTAGCCTTCTTGAGAAGCAATATGTGAGCTAG 978 0.4458 MAGTSSIISISSASLFTPTTPQPKTHCLLKHTKDNDHLPPSSFTTLSSLRISKPKTTTRVNVPPRTRRWSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERNLGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPAGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKIIDQAFAQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKAAGMTCIVTKSGYTEDEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01410 325 SFLD Haloacid Dehalogenase 80 308 - -
Viun9g01410 325 CDD HAD_CbbY-like 87 284 - -
Viun9g01410 325 FunFam HAD family hydrolase 175 298 - -
Viun9g01410 325 Gene3D - 84 301 IPR023214 -
Viun9g01410 325 SFLD phosphoglycolate phosphatase 80 308 - -
Viun9g01410 325 SUPERFAMILY HAD-like 83 304 IPR036412 -
Viun9g01410 325 Gene3D Putative phosphatase; domain 2 96 180 IPR023198 -
Viun9g01410 325 Pfam Haloacid dehalogenase-like hydrolase 85 281 IPR041492 -
Viun9g01410 325 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 48 322 IPR044999 GO:0016787
Viun9g01410 325 NCBIfam HAD-IA family hydrolase 164 281 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01410 Viun-Chr9 15280958 15284988 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01410 - - pvu:PHAVU_009G169900g 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01410 9 15280958 15284988 Viun9g01410 9 15280958 15284988 ECH