Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01409 ATGGCGGAGAAGTTTGGAGTAGCAGCAGTAGCAGAAGAGAGCTCTAACTCCAGGGTTCTTCACCATACGTCAGCGAAGCTCGTCGTTTTGGCCGACCTCAACGTTGATCCTCCTGAAGCCGACGACGACGACTCTTCCCTTGTCCATCCTCCATCGATTGCAACTTTGGCGAATGATGAAAGCGGTCAAGATAAGAGTTTGTTGTCCAAAGACACTGATAGCATTGAAGGTGAAAGTAAAAAGTTGAATAAACTGGGCAAATGTCGTTCCAGACTTAGCAAGACAGAGTCTTCTCTTGATTGTGGAGCTGATGCAGATGGTGATCAACATGTTCAAGGACCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGTGTGAAGACTGGCTTGGTTCATGTTGCAAAGAAGATGCCCAAAAATGCTCATGCACATTTTATACTTGGCTTGATGTACCAAAGATTAAGCCAGCCTCAAAAGGCTGTGTTGGCTTATGAGAAGGCAGAACAGATCTTGCTCAGGCCTGAGGCTGAGATTGATAGGCCGGAGTTGCTTTCGTTAGTTCAGATTCACCATGCACAGTGCCTGTTACTAGAAAGTTCATCTGAAAATAGTTCTGATAAAGAACTTGAGCCTCATGAACTTGAAGAGATTCTGTCTAAGCTGAAAGAGTCAGTGCAGTCAGATGTTAGACAGACAGCTGTATGGAACACACTGGGTTTTATCCTTCTTAAAACTGGTCGCGTGCAGAGTGCTATCTCAGTCTTGTCATCATTGTTGTCCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATTGCTTATCTTCAAATTGGGAATTTGGAATTATCTGCAAAATGTTTCCAGCAATTGATTTTAAAAGATCAAAATCATCCTGCAGCCTTGGTCAATTATGCTGCCCTTCTCTTGGGTAAATATGCTTCAGTTGTGGCAGGTCCTGGTGCAAGTGCCTCTGAAGGTGCCATGGCTGATCAGATCATGGCTGCAAAAGTTGCCAAGGAATGTTTGTTGGCTGCAATTAAAGCAGATAGCAAATCAGCTCATCTATGGGCAAATCTTGCGTATGCATTTTCTGTTAGTGGTGATCATCGAAGTTCCAGCAAATGCTTGGAGAAGGCTGCCAAACTGGAGCCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCACAAGATCGCAGTGAACTGCTTTCATGTGCTGGAAATGAAATGGCTTCTATAATAAGAGATGGTGATTCATCCCTGGTCGAGATTCCAATAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCTCAGCATGAGATAGTGGCAGCATATGAAAGTGAACAGCACGGGTTGAGAGAGGTTGAAGAGCGTGCTCTTTGCAGTTTAAAGCAGGCTATAGCGGAAGATCCAAATGATGCGGTGCAGTGGCATCAACTCGGCGTTCATAGTCTCTGTGCTCGGCAATTCAAAACATCACAAAAGTACTTCAAAGCTGCTGTTGCCTGCGACAGCCATTGCAGCTATGCGTGGTCTAACCTAGGTGTCTCCCTTCAACTATCAGAGGAAGCATCACAAGCTGAAGAAGTATACAAGAAAGCATTGTCTTTGGCAACAAGTGAACAAGCGCATGCTATATTATCCAATTTGGGAATTCTGTACCGCCATCAGAAACAATATCAACGTGCAAAGGCCATGCTTACCAAGTCACTTGAACTTCATTCTGGGTATGCTCCTGCATTCAACAATCTGGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAAGCCAAGTACTGTTTCAACAAAGCTCTCCAATCAGATCCATTGCTGGATGCAGCTAAATCTAATATGATCAAGGCGGTTGTCATGTCAAAGTTATGCAAAGGCCTCACCTCATGCACTCTTAAAGAATGA 1944 0.4455 MAEKFGVAAVAEESSNSRVLHHTSAKLVVLADLNVDPPEADDDDSSLVHPPSIATLANDESGQDKSLLSKDTDSIEGESKKLNKLGKCRSRLSKTESSLDCGADADGDQHVQGPPSSREEKVSSVKTGLVHVAKKMPKNAHAHFILGLMYQRLSQPQKAVLAYEKAEQILLRPEAEIDRPELLSLVQIHHAQCLLLESSSENSSDKELEPHELEEILSKLKESVQSDVRQTAVWNTLGFILLKTGRVQSAISVLSSLLSIAPENYDCLGNLGIAYLQIGNLELSAKCFQQLILKDQNHPAALVNYAALLLGKYASVVAGPGASASEGAMADQIMAAKVAKECLLAAIKADSKSAHLWANLAYAFSVSGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDRSELLSCAGNEMASIIRDGDSSLVEIPIAWAGLAMVHKAQHEIVAAYESEQHGLREVEERALCSLKQAIAEDPNDAVQWHQLGVHSLCARQFKTSQKYFKAAVACDSHCSYAWSNLGVSLQLSEEASQAEEVYKKALSLATSEQAHAILSNLGILYRHQKQYQRAKAMLTKSLELHSGYAPAFNNLGLVFVAEGLLEEAKYCFNKALQSDPLLDAAKSNMIKAVVMSKLCKGLTSCTLKE 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01409 647 SUPERFAMILY TPR-like 463 627 IPR011990 GO:0005515
Viun9g01409 647 MobiDBLite consensus disorder prediction 96 124 - -
Viun9g01409 647 MobiDBLite consensus disorder prediction 1 22 - -
Viun9g01409 647 ProSiteProfiles TPR repeat profile. 354 387 IPR019734 GO:0005515
Viun9g01409 647 Gene3D Tetratricopeptide repeat domain 327 422 IPR011990 GO:0005515
Viun9g01409 647 SMART tpr_5 553 586 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 265 298 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 231 264 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 517 550 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 434 467 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 140 173 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 354 387 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 483 516 IPR019734 GO:0005515
Viun9g01409 647 SMART tpr_5 587 620 IPR019734 GO:0005515
Viun9g01409 647 ProSiteProfiles TPR repeat profile. 517 550 IPR019734 GO:0005515
Viun9g01409 647 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 23 643 - -
Viun9g01409 647 ProSiteProfiles TPR repeat profile. 231 264 IPR019734 GO:0005515
Viun9g01409 647 ProSiteProfiles TPR repeat profile. 587 620 IPR019734 GO:0005515
Viun9g01409 647 Gene3D Tetratricopeptide repeat domain 438 551 IPR011990 GO:0005515
Viun9g01409 647 Pfam Tetratricopeptide repeat 241 300 - -
Viun9g01409 647 Pfam Tetratricopeptide repeat 519 582 - -
Viun9g01409 647 Gene3D Tetratricopeptide repeat domain 552 638 IPR011990 GO:0005515
Viun9g01409 647 Gene3D Tetratricopeptide repeat domain 68 318 IPR011990 GO:0005515
Viun9g01409 647 SUPERFAMILY TPR-like 232 521 IPR011990 GO:0005515
Viun9g01409 647 MobiDBLite consensus disorder prediction 35 73 - -
Viun9g01409 647 Pfam Tetratricopeptide repeat 354 387 IPR019734 GO:0005515
Viun9g01409 647 Pfam Tetratricopeptide repeat 587 618 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01409 433 619 Glycosyltransferase AT3G04240 25.000 2.34e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01409 - - gmx:100820184 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01409 9 15268598 15275587 Viun9g01409 9 15268598 15275587 ECH