Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01396 ATGGCTGCTACCGGAGGCTACGAGGGTCACAACAACCCTGCTCTTGACCCGGATTTGGATACTCCGGATACTCCGGATCTCCAGTTCGCTGAGTTCGGATCGGGTTGTTTCTGGGGAGCGGAGTTGGCCTTTCAGCGAATTGTTGGAGTGGTGAAGACCGAGGTCGGATATACTCAGGGCCACACCCCGGATCCAGATTACAAACTGGTCTGCACCGGAACCACTAACCACGTTGAAGTGGTTCGGGTTCAGTTCGACCCGAAGGTTTGCCCCTACACGGATCTGCTTGCTCTCTTTTGGGCTCGACACGACCCAACTTCCGTTAACCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACAACGAAGAGCAGGCTCGTTTAGCACAGGAATCGAAAGAAGCAAAACAATTGGAGTTGAAGGAGAAGATTGTGACAGAAATTGTTCCAGCTAAGAGGTTTTACAAAGCAGAGGAGTACCATCAACAATATCTGGAGAAGGGTGGAGGAAAAGGTGAAAGCAACAAACAGTCTGCACAAAAAGGTTGCACTGATCCCATCAGGTGCTATGGCTGA 591 0.5042 MAATGGYEGHNNPALDPDLDTPDTPDLQFAEFGSGCFWGAELAFQRIVGVVKTEVGYTQGHTPDPDYKLVCTGTTNHVEVVRVQFDPKVCPYTDLLALFWARHDPTSVNRQGNDVGAQYRSGIYYYNEEQARLAQESKEAKQLELKEKIVTEIVPAKRFYKAEEYHQQYLEKGGGKGESNKQSAQKGCTDPIRCYG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01396 196 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 30 172 IPR002569 GO:0008113
Viun9g01396 196 FunFam Peptide methionine sulfoxide reductase 16 196 - -
Viun9g01396 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Viun9g01396 196 SUPERFAMILY Peptide methionine sulfoxide reductase 23 174 IPR036509 GO:0008113
Viun9g01396 196 Coils Coil 126 146 - -
Viun9g01396 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 11 195 - -
Viun9g01396 196 Gene3D Peptide methionine sulphoxide reductase MsrA 16 196 IPR036509 GO:0008113
Viun9g01396 196 MobiDBLite consensus disorder prediction 172 196 - -
Viun9g01396 196 MobiDBLite consensus disorder prediction 1 24 - -
Viun9g01396 196 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01396 Viun-Chr9 14736583 14737604 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01396 K07304 - gmx:100527085 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01396 9 14736583 14737604 Viun9g01396 9 14736583 14737604 ECH