Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01386 ATGGTCTTCATATCTTGCAGTAGAATCATGATCACAATCCTATTTTTCTTGGTTTGTGTTGGATTCAGCGATGGTGCCAATGTGACACCCTCTGAGGGGAGAAGAGGGAAGTGGCAACTGCTCCTTAACAGCACCGGCGTGGTTGGCATGCATCTGGCTTTAACCTACAGAAACACAGTCATAATGTTCGATCAAACTGGAGCTGGCCCTTCCAGTTACAAACTCCGTAGACGCTTCAATGGAAGCACGTGCAGCAGAAGCAGGCATGATATGATGGACTCCACATGCTATGCTCATTCTGTAGAGTATGACATTAGTACCAATAAAGTGAGGCCTCTGAGGCTTGAAACTGATCCTTGGTGTTCCTCTGGTTCATTTATGAGCAATGGTACTCTTCTACAAATAGGTGGTAATGAAAAAGGTGCCAAAAGGGTGAGATTCTTTAGGCCCTGTGAGAATCACCGATGTGACTGGATGCTATCAAAGAAAACACTATCTGATAGGAGGTGGTATGCTTCAAGTCAGCTACTACCAGAACATGATAGGGTGGTGGTTGTTGGTGGAAGAAGAGCTTTGACATATGAATTTGTACCAAAAATCAGTCCTGGAGAAAAATCCTTTGACCTTCCATTCTTGCACCAAACCAATGACAGGAACGAAGGAGGGAACAACCTGTACCCTTTTCTCCACCTTTCATCAGACGGAAACCTGTTCATTTTCGCCAACCGTGATTCCATCCTACTCAACCTGAGAAGAAACAAAGTGATCAAGACCTTCCCTCGGATTCCAGGAGAAGGGTCGAGAAACTATCCAAGCTCAGGCTCATCTGTGATACTCCCATTGGACCACAGAGACAACTTCCAAAAAGTGGAGGTTATGGTGTGTGGAGGTTCATCCACTGGAGCCTTCTCAGCTGCTGCTAAGCGAAGATTCTTGGAAGGGTTAAGATCATGTGGAAGAATGGTGATCACAGGAGACAAGAACAAGTGGGATATGGAGCACATGCCGAAGCCACGTCTCTTACATGACATGGTGATTCTCCCTAGAGGTGATATCCTAATCATAAATGGTGCTGAACGAGGGTCTGCGGGATATGACAATGCTAGAAACGCTTCTCTTGAACCTTTTCTGTACAGCCCCAGCAAAAGACTTGGAGCAAGGTTCACAGTCCTTATGTCGACCAAGATAGCAAGAGTGTATCACTCATCAGCAACTCTTCTTCCTGATGGGAGGGTGTTGGTTGCGGGTAGTAACCCTCATGGGAGGTACATTTTTCACAATGTTGCATACCCAACTGAGCTAAGACTTCAAGCATTTGTTCCATACTATATGGAGAGGAGGTACCATAGCTTGAGGCCTAGTAACGTGACCATAGAATATAGTGGTACCAGCCATGCAATTGAGTATGGGAACGAGTTTAGAGTTAGGTTCTTCCTGAAGAGGAGGCCTAGCAATGAGATGGGGTTCAGTGCCTATGCACCACCGTTTACCACTCATTCCTTTGCCATGAATCAGAGGATGCTGAAGCTGAGGTGCAGGAGCTTGAAGAGAAGTGGTCATGGATGGGTGGTTGCAGTGTTGGAAGCCCCACCATCATCCCTTGTTGCACCTTCTGGTTACTACATGCTCACGGTTCTCAACGGTGGAATTCCGAGCATGTCTCAGTGGGTTCGGTTTGGACACGCCTAA 1689 0.4654 MVFISCSRIMITILFFLVCVGFSDGANVTPSEGRRGKWQLLLNSTGVVGMHLALTYRNTVIMFDQTGAGPSSYKLRRRFNGSTCSRSRHDMMDSTCYAHSVEYDISTNKVRPLRLETDPWCSSGSFMSNGTLLQIGGNEKGAKRVRFFRPCENHRCDWMLSKKTLSDRRWYASSQLLPEHDRVVVVGGRRALTYEFVPKISPGEKSFDLPFLHQTNDRNEGGNNLYPFLHLSSDGNLFIFANRDSILLNLRRNKVIKTFPRIPGEGSRNYPSSGSSVILPLDHRDNFQKVEVMVCGGSSTGAFSAAAKRRFLEGLRSCGRMVITGDKNKWDMEHMPKPRLLHDMVILPRGDILIINGAERGSAGYDNARNASLEPFLYSPSKRLGARFTVLMSTKIARVYHSSATLLPDGRVLVAGSNPHGRYIFHNVAYPTELRLQAFVPYYMERRYHSLRPSNVTIEYSGTSHAIEYGNEFRVRFFLKRRPSNEMGFSAYAPPFTTHSFAMNQRMLKLRCRSLKRSGHGWVVAVLEAPPSSLVAPSGYYMLTVLNGGIPSMSQWVRFGHA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01386 562 CDD E_set_GO_C 448 558 IPR015202 -
Viun9g01386 562 Gene3D - 32 450 IPR037293 -
Viun9g01386 562 SUPERFAMILY Galactose oxidase, central domain 100 444 IPR011043 -
Viun9g01386 562 Gene3D Immunoglobulins 452 561 IPR013783 -
Viun9g01386 562 SUPERFAMILY E set domains 449 560 IPR014756 -
Viun9g01386 562 Pfam Glyoxal oxidase N-terminus 50 297 IPR009880 -
Viun9g01386 562 PANTHER SECRETED PROTEIN-RELATED 25 559 - -
Viun9g01386 562 Pfam Galactose oxidase-like, Early set domain 463 558 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01386 Viun-Chr9 14384201 14385889 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01386 - - gmx:100814200 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01386 9 14384201 14385889 Viun9g01386 9 14384201 14385889 ECH