Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01276 ATGGCTCCGAGCTTAAGCAAAACAGTGCAACTAGGTTCGTTGGGTCTGGTCCCCGACAATTCACCCTTGTCCATAACCTTAAACGGTTCCGACTTTCTCGCTAACGGCCACCCTTTTCTGACGGAAGTGCCGCACAACATAACGGCCACCCCTTCGCCCTCGGTGTATTCGAAAGCCACCGACACGGCGGTGGGTTGCTTCGTGGGGTTCCACGCGGACGAGGCGAGGAGCCGCCACGTGGCGCCTCTGGGGAAGCTGAGGGGCATAAGGTTCATGAGCCTATTCCGGTTCAAGGTGTGGTGGAGCACACAGTGGGTGGGAAGCAACGGCCACGAGGTGGAACACGAAACCCAAATGATCCTTCTCGACAAGAATCACTCGCTGGGTCGCCCCTACGTCTTGCTGCTTCCCATTCTCCAAGGCTCCTTCCGAGCCTCCCTCCAACCTGGCTTAGATGACTACGTGGACCTTTGCGTGGAGAGCGCCTCCACACATGTCACTGCCTCTAGCTTCGGGAGCTGCTTGTACCTCCACGTCGGCGATGATCCCTTTCGCTTGCTCAGAGAAGCAGCCAAAGTGGTTAGAATGCATTTGGGGACTTTCAAGCTTCTGGAGGAGAAAACCGCGCCAGCGATAATAGATAAGTTTGGATGGTGTACGTGGGACGCGTTTTACCTGAAGGTGCATCCATTAGGGGTGTGGGAAGGGGTGAAGGGCCTTGTGGAGGGAGGGTGCCCTCCGGGGATGGTCCTAATAGACGACGGGTGGCAATCGATTTGTCACGATGAGGATCCCGTGACGGACCAAGAGGGTGTGAACCGAACCTCCGCAGGGGAGCAAATGCCGTGCAGGCTCGTGAAGTTCGAGGAAAACTACAAGTTCAGGAATTATCGTAGTGTTGAAGGGTCTGAGAAAGGTTTGGGCGCGTTCGTTAGGGATTTGAAGAAGCGGTTTAGGAGCGTGGAGCAGGTGTATGTTTGGCACGCGCTTTGTGGATACTGGGGTGGAGTCAGACCTGAGGTTCCGGGCATGCCCGAGGCCAAGCTTGTTACTCCGAAGCTCTCGCAGGGGTTACAAATGACAATGGAAGATTTAGCGGTGGATAAGATCGTGAATAACGGTGTGGGACTTGTGCCACCTCACCTCGCTCACCGTTTGTACGAGGGGCTCCACTCGCGTTTGGAATCGGCGGGAATTGACGGCGTCAAAGTTGACGTTATACATTTGCTGGAAATGCTCTCAGAGGAATTCGGTGGGCGTGTTGAGTTAGCCAGAGATTATTACAAAGCACTCACTGCATCGGTGAAGAAGCATTTCAAAGGCAATGGAGTCATTGCAAGCATGGAGCACTGTAACGACTTCTTTCTCCTTGGCACTGAAACCATAGCCCTTGGTCGCGTAGGGGATGATTTCTGGTGCACTGATCCCTCTGGGGATCCAAATGGAACGTATTGGCTCCAAGGGTGCCACATGGTGCATTGTGCCTACAACAGCTTGTGGATGGGAAATTTTATTCAACCAGATTGGGACATGTTTCAATCTACTCACCCATGTGCTGAGTTTCATGCTGCTTCCAGAGCCATCTCTGGTGGACCCATTTACGTCAGTGATTGTGTTGGAAAGCACAACTTCAAGTTGCTCAAGAGCCTCTCTTTGCCTGATGGCACCATCTTGCGTTGCCAGCATTATGCACTCCCCACTCGAGATTCTTTGTTTGAAGACCCTTTACACGATGGGAAAACAATGCTCAAAATTTGGAATCTCAATAAATATACAGGTGTGTTGGGTGTGTTTAATTGCCAAGGAGGAGGGTGGTGTCCTGTGACGCGGCGAAACAAGAGTGCCTCTGAATTCTCACACGCTGTGACATGCTTGGCGAGTCCTCAAGATATAGAATGGAGCAATGGAAAAGTTCCGATGTGCATAAAAGGGGTGGATGTGTTTGCTGTGTATTGCTTCAAGGACAAGAAACTGAAGCTGATGAAATGGTCAGAGAAATTGGAAGTTTCACTGGAGCCATTTAGTTTTGAGCTGTTGACAGTGTCTCCAGTGACAGTGTTATCAAAGGGGTTAATTCAATTTGCTCCAATTGGATTAGTGAACATGCTTAACTGTGGTGGTGCCATTCAGTCTCTGGAGTTTGATGATGACAGAGATGTGGTTAAAATTGGAGTGAGGGGTTGTGGGGAGATGAGGGTGTTCTCATCAGAGAAGCCAATTAGTTGCAAAATAGATGGAGTAGCTGTGAAATTTGATTATGAGGATAGAATGGTGAGAGTCCAAGTTTCTTGGCCTAGTTCTTCAAAATTGTCAATGCTTGAGTTTTTGTTTTGA 2334 0.5043 MAPSLSKTVQLGSLGLVPDNSPLSITLNGSDFLANGHPFLTEVPHNITATPSPSVYSKATDTAVGCFVGFHADEARSRHVAPLGKLRGIRFMSLFRFKVWWSTQWVGSNGHEVEHETQMILLDKNHSLGRPYVLLLPILQGSFRASLQPGLDDYVDLCVESASTHVTASSFGSCLYLHVGDDPFRLLREAAKVVRMHLGTFKLLEEKTAPAIIDKFGWCTWDAFYLKVHPLGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDEDPVTDQEGVNRTSAGEQMPCRLVKFEENYKFRNYRSVEGSEKGLGAFVRDLKKRFRSVEQVYVWHALCGYWGGVRPEVPGMPEAKLVTPKLSQGLQMTMEDLAVDKIVNNGVGLVPPHLAHRLYEGLHSRLESAGIDGVKVDVIHLLEMLSEEFGGRVELARDYYKALTASVKKHFKGNGVIASMEHCNDFFLLGTETIALGRVGDDFWCTDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFKLLKSLSLPDGTILRCQHYALPTRDSLFEDPLHDGKTMLKIWNLNKYTGVLGVFNCQGGGWCPVTRRNKSASEFSHAVTCLASPQDIEWSNGKVPMCIKGVDVFAVYCFKDKKLKLMKWSEKLEVSLEPFSFELLTVSPVTVLSKGLIQFAPIGLVNMLNCGGAIQSLEFDDDRDVVKIGVRGCGEMRVFSSEKPISCKIDGVAVKFDYEDRMVRVQVSWPSSSKLSMLEFLF 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01276 777 Pfam Raffinose synthase or seed imbibition protein Sip1 29 760 IPR008811 -
Viun9g01276 777 SUPERFAMILY (Trans)glycosidases 210 561 IPR017853 -
Viun9g01276 777 Gene3D Aldolase class I 214 551 IPR013785 -
Viun9g01276 777 PANTHER - 28 772 IPR008811 -
Viun9g01276 777 FunFam Probable galactinol--sucrose galactosyltransferase 5 214 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01276 Viun-Chr9 12629612 12634084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01276 27 777 Glycoside Hydrolase AT5G40390 64.482 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01276 K06617 - gmx:100800308 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01276 9 12629612 12634084 Viun9g01276 9 12629612 12634084 ECH