Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01274 ATGGACGGAGATTCTGAAAATCGTGAAAATAGTGATTCCACCTTTGTTTGGGATCACAAATCGCAGCTTTACTTCCACGCTAGTAGTGGATTTTACCATGACCCTAATGCCGGCTGGTATTATAGCAGCAGAGATGGTGCTTATTACAAATTCGAGGACGGGAATTATGTACTTTTAGATTCCAATAAGGATGATAGTGCAGACACATATATGTGCAAGGAAACTACCACAGAAAGTCCTCAACAATTCTGTGATGGCAACGACAATGAGGATTATATTTCCTTTCTTGAAAATAGATCTGAAACAAACCAACAGACAAGAACCCTGGCTAATGAAACACGTGATGGGACAGGGGGTTGCTACCAAGTGCCGTCTTGTCATATCCCCATATTTGCACTTTATGCCACAAATTCTGGGAGTAGTCCAACTTGTGAAAAGCCACCTCCACCACCATCAGAATGGTTAGAGGACACACTTATTGATCTTTACTTGTCTGGCTACAAGAATATAGCCGTAAGTGAAGCTGATGGAGTGACAGTGCCGCTTGAAACAGATGATAGATATAACTCTTTAGCAGCTGATGCTTACAGCAAAACTTATGAAGTGGAAGGTGAGTGGAACCCAAACCAAGTAGGTGAAAATGGCTTAGCTGATACTAAAAGTACTGTAGATGAAGGTGTAGCTTACAACAATTCTTATGAACTGGAAGAGGGTGAGTGGGTCCCGGACATGGAGGATGAATGTGACATAGCTGATAAAAGTACCATAGATGAAGGTATGTTGTTGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATTTGGTTTTAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTACGAGATCCAAAAGAGATGAAAAAGATAAAGTGGCGAGGTTGGTTGGAAGATTGGTGAAACCATCTGCAAAACAACATCCATCTATCCCTTCTAGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATTTAGATCTGCAAATTAAACATCAATACAGAGATAGGGCTGCTGAAAGAAGAATATTGCATGGTGGCTTTGGCACGGGTCCAGGACAGAAGAATCTGTCAGATGTTTATAATACGCCATCTTCACCTGATGCTGGTTGTCCTCAAGAAGCTGCATCAGAGGCCTTGGAGATGTCATTTGGAGCAGGTAGTTATGCCAGAAAACTTCTGAAAAGCATGGGTTGGAAAGAGGGGGAGGGGCTTGGAAGCTCTACGAAGGGCTTGGTAGAACCTATTCAACCAGTTGGAAATGTTGGCACTGCAGGTTTGGGATGGTCTCGTTGA 1344 0.4286 MDGDSENRENSDSTFVWDHKSQLYFHASSGFYHDPNAGWYYSSRDGAYYKFEDGNYVLLDSNKDDSADTYMCKETTTESPQQFCDGNDNEDYISFLENRSETNQQTRTLANETRDGTGGCYQVPSCHIPIFALYATNSGSSPTCEKPPPPPSEWLEDTLIDLYLSGYKNIAVSEADGVTVPLETDDRYNSLAADAYSKTYEVEGEWNPNQVGENGLADTKSTVDEGVAYNNSYELEEGEWVPDMEDECDIADKSTIDEGMLLDEEKWRAQYGQVTESGKDLVLEVPIVDLWDWEMVTRSKRDEKDKVARLVGRLVKPSAKQHPSIPSSGGKLRSAPICEAHLDLQIKHQYRDRAAERRILHGGFGTGPGQKNLSDVYNTPSSPDAGCPQEAASEALEMSFGAGSYARKLLKSMGWKEGEGLGSSTKGLVEPIQPVGNVGTAGLGWSR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01274 447 PANTHER RNA-BINDING PROTEIN 9 344 - -
Viun9g01274 447 Pfam OCRE domain 12 53 IPR041591 -
Viun9g01274 447 CDD OCRE 13 54 - -
Viun9g01274 447 SMART G-patch_5 400 446 IPR000467 GO:0003676
Viun9g01274 447 Pfam G-patch domain 404 444 IPR000467 GO:0003676
Viun9g01274 447 ProSiteProfiles G-patch domain profile. 402 447 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01274 Viun-Chr9 12583890 12589088 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01274 - - gmx:100806477 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01274 9 12583890 12589088 Viun9g01274 9 12583890 12589088 ECH