Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01248 ATGGGCCCTGCAGAAATTGTGGATTTATCTAGTGATGATGAAAGTGAAACAGTTGGTTTGAAAGCTGTTAAGTTGGAGGGAGATTTTGTTAAGGATAAGAGATATCAAAGTCATATAACTGGACAAGATTCTGAAGAAAACCTAAGTTCTAATGGTCCAAGTACAGGTCATAGTAACTCCAGTGTATTGGAGCAGGGACCATCACCAGTTGATGACACAGGCATTTCTTACGTGTCACCCATTGGTGCAGCACCCCTGTGCAGGCAGTTTTGGAAAGCTGGAAACTATGATGATGGGATTGGTTCTAAAGTCACAGTTCAAAATGCTAAAAGTTATCTACACGTGCACCCCATGTTCCTCCACTCAAATGCAACTTCCCATAAGTGGGCATTTGGTGCCATAGCGGAGCTTCTTGATAATGCAGTTGATGAGATCCAAAATGGGGCTACCTTTGTCATTGTAGATAAAACTTCAAATCCAAGGGATGGGAGTCCAGCGTTGTTGATTCAAGATGATGGTGGTGGAATGGATCCAGAGGCAATGCGGCGTTGCATGAGTTTTGGATTTTCAGATAAGAAGTCACAGTTTGCTATTGGACGATATGGAAATGGCTTCAAGACCAGTACTATGAGGCTTGGTGCAGATGTCATAGTCTTCAGTTGCCATCTAAACAATAGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACATATTTGACACAAACACAGCTTGACAGAATTGTAGTGCCCATGGTGAATTATGAATTTAATACATCCACTGGATCATTGAAAGTATTAAATGGCAATGAGCATTTTATGTCTAATTTATCCTTGCTGTTGCGTTGGTCACCATATTCATCAGAGGCAGATCTGCTGAAACAATTTGATGACATTGGATCTCATGGTACTAAAGTTATTATCTACAATTTGTGGTGCAACGATGATGGGAATTTGGAGCTAGACTTTGATACAGATCCTAAGGATATTCGTATTGCTGGGGATATCAAGCGTATTGATACACTTAAAGCTTGGAAGAGTATAAATGAGGATCACATTGCTAATCGGTTTCGTTACTCCTTACATGTATATTTGTCCATATTGTACTTGAAGATCCCAGAATGTTTTCAAATTATTTTGCGAGGGCAAGTTGTGAAGCCGCACAACATTGCTGATGATCTTAAATATCCTCAATTTGTTAAATATGCACCATTTATTGGTGGATCTGCAAAGGGAACAGCTTTGACAATCACAACAATTGGATTTCTTAAGGAAGCTCCTCAAGTCAATATCCACGGTTTCAATGTATATCACAAAAATCGGCTTATACTGCCATTTTGGCAGGTTGTAAGCTATTATGACAGTAGAGGTAGAGGAGTTGTTGGTATCCTACAGGCAGATTTTATTGAGCCAACACATAACAAACAAGATTTTGAGAGAACTTCCCTGTTTCAAAAGCTTGAAGTGCGATTGAAGGATATGACATGGGAATACTGGGATACACATTGTACATTGTTTGGATACAAAGAAAAGAGGAAGCTTAAACCTGGGATTACATCAATGCATAAACCACTGGCTGTAGAAAAACCAGTTATATTGAACAAAAGTTCCTCCTCTCTTGTCAATGCAAAAGCATACGGGAATTCCTTACAGTGTTCCAAAAATCTGCAAAGACCGGAACAAGGTTCTCAGAATAAGAGGAAGAACACACATGAACTGGTAGATCTTTTGAATACACAAAAGCATGCAAGGACAGATATTGTTACCAGTGTTGGGTTCAGTCAGAATAAACAGACCACTGCAACTCCAGCTGGCCAGGTGGAAGACCCGAAGAATTTACATTTAATTCAACAAAATAAGCAACTGCGTGCAAAATGTCTAGAATTTGAAAAGACAGGAGAAGAACTTAATCTCAAGGTGGCGAATCTTAAAAGTAAAATACAAGAAGCGGAAGATGAGTACCAACGGCTTTTGGCAGAAATAAAGTCCGTGGACGTGAAAGAAGAGTAG 2010 0.395 MGPAEIVDLSSDDESETVGLKAVKLEGDFVKDKRYQSHITGQDSEENLSSNGPSTGHSNSSVLEQGPSPVDDTGISYVSPIGAAPLCRQFWKAGNYDDGIGSKVTVQNAKSYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVIVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKKSQFAIGRYGNGFKTSTMRLGADVIVFSCHLNNRILTQSIGLLSYTYLTQTQLDRIVVPMVNYEFNTSTGSLKVLNGNEHFMSNLSLLLRWSPYSSEADLLKQFDDIGSHGTKVIIYNLWCNDDGNLELDFDTDPKDIRIAGDIKRIDTLKAWKSINEDHIANRFRYSLHVYLSILYLKIPECFQIILRGQVVKPHNIADDLKYPQFVKYAPFIGGSAKGTALTITTIGFLKEAPQVNIHGFNVYHKNRLILPFWQVVSYYDSRGRGVVGILQADFIEPTHNKQDFERTSLFQKLEVRLKDMTWEYWDTHCTLFGYKEKRKLKPGITSMHKPLAVEKPVILNKSSSSLVNAKAYGNSLQCSKNLQRPEQGSQNKRKNTHELVDLLNTQKHARTDIVTSVGFSQNKQTTATPAGQVEDPKNLHLIQQNKQLRAKCLEFEKTGEELNLKVANLKSKIQEAEDEYQRLLAEIKSVDVKEE 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01248 669 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 132 226 - -
Viun9g01248 669 MobiDBLite consensus disorder prediction 41 67 - -
Viun9g01248 669 Coils Coil 633 667 - -
Viun9g01248 669 MobiDBLite consensus disorder prediction 34 74 - -
Viun9g01248 669 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 130 333 IPR036890 -
Viun9g01248 669 Gene3D - 107 311 IPR036890 -
Viun9g01248 669 FunFam MORC family CW-type zinc finger protein 4 116 317 - -
Viun9g01248 669 Pfam Morc6 ribosomal protein S5 domain 2-like 359 499 IPR041006 -
Viun9g01248 669 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 49 663 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01248 Viun-Chr9 12089200 12110269 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01248 - - gmx:100795667 1164.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01248 9 12089200 12110269 Viun9g01248 9 12089200 12110269 ECH