Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01241 ATGCTCTCAAACTCCGTGCCACCAAGAAGCAGCAAAATTCAACACCTGTGCTCTGTTTTCGGCTTAGATCTGTTTCCTTCCAACACTTGTCCAGAGCCAAAGCTTCAAGCTTTTTCTATATTTTTCTCCTCTTCAATTACCATACCATATAAATATACAGATAAAGAAATGGGGTCTTTGTTGAGTTCACCGAAAACGAAAGAACAGATGGAAGCAGCGTTGAATAAGGTTAAGGATATAGTATCCTCTTCCCCTGTTGTTGTCTTCAGTAAGACATACTGTGGTTACTGCAAGCGGGTCAAAGATCTGTTCCAACAGCTTGGAGCATCCTACAAGGTTGTTGAATTGGACACAGAAAGTGATGGAGGTGATATTCATTCAGCTTTAATCGAGTGGACAGGGCTTAGGACTGTGCCTAACGTGTTTATTGGAGGAAAGCACATTGGTGGTTGTGATACTGTTTTGGAGAAATACAAAACAAAACAACTGGTTCCTCTTCTGAATGATGCTGGGGCAATTGCCAATAACTCTGCTCAACTGTGA 543 0.4162 MLSNSVPPRSSKIQHLCSVFGLDLFPSNTCPEPKLQAFSIFFSSSITIPYKYTDKEMGSLLSSPKTKEQMEAALNKVKDIVSSSPVVVFSKTYCGYCKRVKDLFQQLGASYKVVELDTESDGGDIHSALIEWTGLRTVPNVFIGGKHIGGCDTVLEKYKTKQLVPLLNDAGAIANNSAQL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01241 180 PRINTS Glutaredoxin signature 131 144 IPR014025 -
Viun9g01241 180 PRINTS Glutaredoxin signature 145 158 IPR014025 -
Viun9g01241 180 PRINTS Glutaredoxin signature 86 104 IPR014025 -
Viun9g01241 180 Pfam Glutaredoxin 86 148 IPR002109 -
Viun9g01241 180 NCBIfam glutaredoxin 86 165 IPR011899 -
Viun9g01241 180 Gene3D Glutaredoxin 65 180 - -
Viun9g01241 180 CDD GRX_GRXh_1_2_like 91 166 - -
Viun9g01241 180 PANTHER GLUTAREDOXIN 2 64 173 - -
Viun9g01241 180 ProSitePatterns Thioredoxin family active site. 86 104 IPR017937 -
Viun9g01241 180 FunFam Glutaredoxin 2 71 180 - -
Viun9g01241 180 ProSiteProfiles Glutaredoxin domain profile. 74 174 - -
Viun9g01241 180 SUPERFAMILY Thioredoxin-like 75 173 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01241 Viun-Chr9 11991644 11993443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01241 71 173 Miscellaneous Gene Families AT3G02000 41.284 2.39e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01241 K03676 - qsu:111991481 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01241 9 11991644 11993443 Viun9g01241 9 11991644 11993443 ECH