Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01239 ATGCCACAAGCACAATCTCTCTTCTCTCCCTTCACTCTTCCATTGCCTTCACCCTATTCCAATCTCAACTTCCAACGACACCGTTTCCTTGCTCACCCAATTTCACCCCTACTTCAAACCACCTCGATTGCCTCCTCAAACGCCACCGTTTCGGGCAATGCAGTTACCTCCATTCAAACTCTCCCCCAGCTGATTGAAACGCTGATTTCCGGGGTGAATTTGTCGGAAGATGAAGCCGAAGCGTGTTTGGACTCGCTGCTTCACGACCCAAACGAGGCCTTAATCAGCGCGGTTCTTGTGCTTCTCAGAGCTAAAGGAGAGACTTATGAAGAAGTTGTGGGGTTGGCAAGGGCAATGTTGAGACATGCCACGAAGGTTGAGGGCTTGAACGATGTTGTGGACATTGTGGGAACCGGAGGCGACGGTGCCAACACCGTCAACATTTCAACCGGGGCTTCCGTTCTCGCGGCGGCTTGCGGTGCCAGAGTTGCGAAGCAAGGGAACCGGTCAAGTTCTTCAGCGTGTGGAAGTGCAGACGTGTTAGAAGCTCTGGGAGTGGTGATTGATTTAGGTCCTGAGGGAGTAAAGAAGTGTGTGAGTGAAGCTGGGATTGGGTTTATGATGTCTCCAAAATATCACCCGTCGATGAAGATTGTCAGGCCAATAAGAAAGAAGTTAAAGATCAAAACTGTATTCAACATATTGGGTCCAATGTTGAATCCAGCACGTGCACCTTTTGCAGTTGTTGGAGTATACACAGAGGACTTGGTCTCCAAAATGGCTAAAGCACTCAACAGATTTGGCATGAAAAGGGCTTTAGTTGTTCACTCTGAAGGTTTGGATGAGATGAGTCCTCTTGGACCTGGTTTAGTGCTTGATGTTACTGCTGACAGGGTTGATAAGTTCTCATTTGATCCCCTGGACTTTGACATTCCTCGTTGTACTATTGAGGACTTAAAAGGTGGTGATCCCGAGTACAATGCAGAGGTTCTGAAACGAGTTCTAGGGGGAGAGAGAGGGCCTATTGCAAATGCTTTAATTCTAAATGCAGCAGCAGCTCTATTGGTTTGTGGCCGTGTAAGGAACCTAGCTGAAGGGGTGGCTGTGGCGCGTGAAACACAACAATCAGGGAAGGCTCTAAAAACTCTCAACTTGTTCAAGGATATCTCTAATAAATTTAAAGATGATGTGGGCATGGATGTTTGA 1206 0.4768 MPQAQSLFSPFTLPLPSPYSNLNFQRHRFLAHPISPLLQTTSIASSNATVSGNAVTSIQTLPQLIETLISGVNLSEDEAEACLDSLLHDPNEALISAVLVLLRAKGETYEEVVGLARAMLRHATKVEGLNDVVDIVGTGGDGANTVNISTGASVLAAACGARVAKQGNRSSSSACGSADVLEALGVVIDLGPEGVKKCVSEAGIGFMMSPKYHPSMKIVRPIRKKLKIKTVFNILGPMLNPARAPFAVVGVYTEDLVSKMAKALNRFGMKRALVVHSEGLDEMSPLGPGLVLDVTADRVDKFSFDPLDFDIPRCTIEDLKGGDPEYNAEVLKRVLGGERGPIANALILNAAAALLVCGRVRNLAEGVAVARETQQSGKALKTLNLFKDISNKFKDDVGMDV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01239 401 Hamap Anthranilate phosphoribosyltransferase [trpD]. 63 389 IPR005940 GO:0000162|GO:0004048
Viun9g01239 401 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 61 126 IPR036320 -
Viun9g01239 401 Pfam Glycosyl transferase family, a/b domain 130 380 IPR000312 GO:0016757
Viun9g01239 401 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 127 398 IPR035902 -
Viun9g01239 401 NCBIfam anthranilate phosphoribosyltransferase 65 386 IPR005940 GO:0000162|GO:0004048
Viun9g01239 401 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 58 391 IPR005940 GO:0000162|GO:0004048
Viun9g01239 401 FunFam Anthranilate phosphoribosyltransferase, chloroplastic 46 127 - -
Viun9g01239 401 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 63 126 - -
Viun9g01239 401 Pfam Glycosyl transferase family, helical bundle domain 63 123 IPR017459 -
Viun9g01239 401 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 131 384 IPR035902 -
Viun9g01239 401 FunFam Anthranilate phosphoribosyltransferase 127 392 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01239 K00766 - gmx:100794615 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01239 9 11935191 11939385 Viun9g01239 9 11935191 11939385 ECH