Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01217 ATGCTGAGAATCGCCGCGAGCGCAAAGAGACTTCTTCGAACGCCGTCGTTGGAGGCGCCACCGTTGGGGATTAGGGTTCTGCCGCGCCTCTATCACGAGAGGGTGGTGGACCACTACGACAACCCCCGCAATGTCGGATCCTTCGACAAGAACGACCCCACTGTGGGAACTGGTCTTGTTGGGGCACCCGCGTGTGGCGACGTAATGAAACTCCAAATTAAGGTTGACGAGAAAACTGGAAAGATCATCGATGCTCGCTTCAAAACCTTCGGATGTGGATCCGCCATTGCTTCTTCGTCTGTCGCTACTGAATGGGTGAAGGGAAAGCAAATGGAGGAAGTTTTGTCGATTAAAAACACTGAAATTGCAAAGCATCTTTCACTTCCACCCGTCAAGCTTCACTGCAGCATGCTTGCAGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAACGTGCCTCAATAACTACTGAGGGGCAGGGAACAACTGCAGAGAAAACTGCCACTGCTTGA 519 0.5067 MLRIAASAKRLLRTPSLEAPPLGIRVLPRLYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGKIIDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRASITTEGQGTTAEKTATA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01217 172 SUPERFAMILY SufE/NifU 30 154 - -
Viun9g01217 172 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Viun9g01217 172 FunFam Iron-sulfur cluster assembly protein 31 170 - -
Viun9g01217 172 Gene3D - 30 171 - -
Viun9g01217 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 16 162 IPR002871 GO:0005506|GO:0016226|GO:0051536
Viun9g01217 172 NCBIfam Fe-S cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
Viun9g01217 172 CDD IscU_like 30 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01217 Viun-Chr9 11514964 11516788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01217 K22068 - gmx:100806169 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01217 9 11514964 11516788 Viun9g01217 9 11514964 11516788 ECH
Viun3g04417 3 51956304 51958539 Viun9g01217 9 11514964 11516788 PCT