Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00868 ATGTTAAAGCAAATTCTTAGCAAATTGCCAAAGAAGTTGCCAAAATCTGACACATCGGATTCTGCCCAGAGTGATTCTGGGAGTGCTACTACTTTTGCAAATGTCTTTCAGTATTCGAATGTTGGGGTTGCCATTTCAAGTAAATTAAATGCAGTGAAGCGGGTATCATCTGTGGTATTTCCAGCTAGCTTGAGTGCTGGAGTGGAAGCAGTTGATCCCCATATATCTTTCAAAGATGTTTCAAATATACAGAAGCAAAACCTGTTTATCAGTAAGTTGAATCTTTGCTGCAGTGTTTATGATAAGAATTGCACAGAGCAAGATGTTAAACATCAAATATTAGTAGAGCTTGTTGATTTTGTTTCTTCTGGATCTGCGAAGTTCACAGAACCATCAATAGCTGCAATGTGTAAAATGTGTTCAAGTAATTTGTTCAGGGTTTTCCCACCTAAGTTTCGTCCTAGTGCTTCTGGTGTAGAAACAGAAGATGAAGAGCTTATGTTTGATCCTTCCTGGTCTCACCTGAAAATTGTTTATGATCTTCTCCTTCAATTCATAAATTATAACGCGCTTGATCTAAAGGTGGCAAAATTGCATATTGATAATGCGTTCATTGTTAGATTGCTTGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGATTGCCTGAAAGCAATTCTGCATAGAATCTATGGGAAATTCATGGTACACAGGCCTTTCATACGGAAATGTGTCAGCAATATCATCTACCGATTTGTTTTTGAGACTGAACGTCATAATGGAATTGCTGAGTTGCTGGAGATTTTTGGGAGTGTGATTTGTGGGTTTGCGTTGCCATTGAAGGAGGAGCACAAAATGTTTCTGTTTAGGGTTTTAATGCCTTTACACAAACCTAAATCTGTTGGTAGTTATCATCAGCAGTTAACATATTGTGTTTTACAGTTCATTGATAAGGATCCAACACTGGCTAGCACGGTGATAACGGGGCTATTGAAGTACTGGCCTGTAACAAATAGCCAAAAGGAGCTAATGTTCATAAGTGAGTTAGAAGAGGTTTTGGATGCCACAATCATGACTGAATTTCAGAAGGTTATGGTCCCACTGTTCCGACGAATAGCTTGCTGTCTCAACAGCTATCATTACCAGGTGGCTGAACGAGCTCACTTGCTATGGAACAACGAACACATCTTCGATGTTGTCTCCCAAAACCGGGAGGTGATTCTGCCTCTTGTGTTCACAGCACTTGTACATAACACCCAATATCACTGGAACCGAGCAGTGCTCAACCAGACCGAGAACATGAGGAAGATGCTGTCTCAGATGGACGAGGAACTGGTGCTTGCCTGCCAACTCAAGTTGAAGGAGGAAGATTCAAGGTCAAGTGCCGCAGCTGAGCAGCGAAGAGTGACATGGGAACGTCTTGAAGCTGCTGCCACTGCCAACATCCAACCTATAGCTGTAGCAGGTGATGTTTTAGCATCTCCTGCATGTTCGGTGGCATGTTAG 1506 0.4163 MLKQILSKLPKKLPKSDTSDSAQSDSGSATTFANVFQYSNVGVAISSKLNAVKRVSSVVFPASLSAGVEAVDPHISFKDVSNIQKQNLFISKLNLCCSVYDKNCTEQDVKHQILVELVDFVSSGSAKFTEPSIAAMCKMCSSNLFRVFPPKFRPSASGVETEDEELMFDPSWSHLKIVYDLLLQFINYNALDLKVAKLHIDNAFIVRLLDLFDSEDPRERDCLKAILHRIYGKFMVHRPFIRKCVSNIIYRFVFETERHNGIAELLEIFGSVICGFALPLKEEHKMFLFRVLMPLHKPKSVGSYHQQLTYCVLQFIDKDPTLASTVITGLLKYWPVTNSQKELMFISELEEVLDATIMTEFQKVMVPLFRRIACCLNSYHYQVAERAHLLWNNEHIFDVVSQNREVILPLVFTALVHNTQYHWNRAVLNQTENMRKMLSQMDEELVLACQLKLKEEDSRSSAAAEQRRVTWERLEAAATANIQPIAVAGDVLASPACSVAC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00868 501 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g00868 501 PIRSF PP2A_B56 3 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun9g00868 501 SUPERFAMILY ARM repeat 86 460 IPR016024 -
Viun9g00868 501 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun9g00868 501 FunFam Phosphoprotein phosphatase, putative 82 475 - -
Viun9g00868 501 Gene3D - 82 477 IPR011989 -
Viun9g00868 501 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00868 Viun-Chr9 6559264 6562810 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00868 K11584 - gmx:100814349 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00868 9 6559264 6562810 Viun9g00868 9 6559264 6562810 ECH