Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00861 ATGGCAACGCACCAACTTCCCCCGGAGAAGGTGGTGAAGATGCTCAAGGAAAATGGGTTCACCAAATTGAAGCTCTTTGATGCGGATCAACTCATTATGGCAGCTCTTATGGGGACCGATATCCAAGTCATGCTTGCAATACCCAACAACATGCTGCAAATGATAAGTACCAGTCCTAAAGCTGCGGATTCTTGGGTCTATGAAAATGTCACCACTTACTTCTTCAATGGTGGCGTCAAAATCAAGTATGTTGCTGTGGGTAATGAGCCTTTTCTTAAAGCATATAATGGTACCTTTGCGAAGAAAACGCTGCCAGCCCTGAAGAATATACAGACATCACTTAATAAGGCCGGGTTGAGTTCAAAGGTCAAAATCACTGTTCCATTCAATGCTGATATTTACTATTCACCTGATTCAGATCCAGTTCCATCAGCTGGTGACTTCAGGCCTGAAATGAGAGACCTCACCATTGAGATAATCCAGTTCTTGTATGCAAACAATGCACCTTTCACAGTTAATATCTACCCTTTCCTTAGTCTTTATTTCAACGAAGATTTCCCTTTTGATTTTGCATTTTTTGATGGAAAAAGCAAGCCTCTTAGGGACGGTAAGGCACTTTACACCAATGTGTTTGATGCAAATCTTGACACTCTTCTGTGGGCTTTAGACAAGGCAGGGTATCCTGACATGAAGGTGCTGATTGGGGAAATTGGGTGGCCAACAGATGGTGATAAGAATGCTAATGCCAAGAGTGCAAGGAGGTTCAACTTTGGTTTGCTTAAACATGCTCTGAGTGGCAAGGGTACCCCTAAAAGGAAAGGCACAATTGACTTGTACATGTTCAGCCTCATTGATGAGAACACTAAAAGTGTTGCTCCTGGGAACTTTGAGAGGCATTGGGGGGTTTTTGAGTTTGATGGGAAGCCAAAGTATGAATTAGACTTAACTGGTCAGCACAAGGAAAAAGGCCTTATCCCTGTGGAAGGTATAAAGTACCTGCAAAAGAGGTGGTGTGTTTTGAATCCAGATGTTACTTACTTTGATCATTTATTGGCTGGTAGCATTGACTATGCTTGTACCTTTTCTGATTGTACTTCCCTTGGCTATGGCTCTTCTTGCAATCATCTTAGTCTCCAAGGGAATGCATCTTATGCTTTCAATATGTATTATCAAGTAAATAACCAACAGGGTTGGAGCTGTGATTTCTCTAGTTTGGCTACCATAACACAGAAGGATCCATCACAGAGTGGTTGCCAATTTCCTGTGATGATAGCTAGCAGTTCATCTTTGCTGCTGCTGCATGAAAGACTTTTATGTATCCTAAAGAAAGCATTGGAGGTTTATATTTTTGTTATGATTTTGTTATAG 1368 0.4152 MATHQLPPEKVVKMLKENGFTKLKLFDADQLIMAALMGTDIQVMLAIPNNMLQMISTSPKAADSWVYENVTTYFFNGGVKIKYVAVGNEPFLKAYNGTFAKKTLPALKNIQTSLNKAGLSSKVKITVPFNADIYYSPDSDPVPSAGDFRPEMRDLTIEIIQFLYANNAPFTVNIYPFLSLYFNEDFPFDFAFFDGKSKPLRDGKALYTNVFDANLDTLLWALDKAGYPDMKVLIGEIGWPTDGDKNANAKSARRFNFGLLKHALSGKGTPKRKGTIDLYMFSLIDENTKSVAPGNFERHWGVFEFDGKPKYELDLTGQHKEKGLIPVEGIKYLQKRWCVLNPDVTYFDHLLAGSIDYACTFSDCTSLGYGSSCNHLSLQGNASYAFNMYYQVNNQQGWSCDFSSLATITQKDPSQSGCQFPVMIASSSSLLLLHERLLCILKKALEVYIFVMILL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00861 455 FunFam Glucan endo-1,3-beta-glucosidase 8 332 429 - -
Viun9g00861 455 Gene3D - 332 429 - -
Viun9g00861 455 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 409 IPR044965 GO:0004553|GO:0005975
Viun9g00861 455 SMART X8_cls 336 420 IPR012946 -
Viun9g00861 455 Pfam X8 domain 337 407 IPR012946 -
Viun9g00861 455 FunFam Glucan endo-1,3-beta-glucosidase 5 1 321 - -
Viun9g00861 455 ProSitePatterns Glycosyl hydrolases family 17 signature. 230 243 IPR000490 GO:0004553|GO:0005975
Viun9g00861 455 Pfam Glycosyl hydrolases family 17 8 314 IPR000490 GO:0004553|GO:0005975
Viun9g00861 455 SUPERFAMILY (Trans)glycosidases 5 313 IPR017853 -
Viun9g00861 455 Gene3D Glycosidases 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00861 Viun-Chr9 6527608 6532010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00861 1 424 Miscellaneous Gene Families AT2G19440 58.019 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00861 - - gmx:100781894 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00861 9 6527608 6532010 Viun9g00861 9 6527608 6532010 ECH