Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00850 ATGGTGAAACATGAGACAGTGATGGAGCATGAGGAGGCTAATGCAGAAGCCACAGCAGATATATTCCCTGCAGATGATGCGTATGCCATGTTCTTGTGGGTGGGAACACCAGTGCAAATTCTGTTCCTTCTCATTCACACTGGGAGCCCCATCACGTGGTTCCAGTGTGGCCCCTGCACCCACTGCTACCCCATGCACCGTCCTCTCTTCAACTCACGTGCATCAACCTCTTTCCGACAACTTGGCTGCTACTCCGACACGTGTCTCATTCCAATGATGAGGGGTATTTTCGGAAACTGCACTGGAAGGAGTTGTAGATACAGTGTAGAATATGACATGAAATCTCAGTCTCGTTCCTTCGGTGTCATGGTTACTGACACCCTTAACTTTGAGCACTCCAATGTTGAAGTCAAGGACTTCGTAATGGGGTGTGGGAATTCTTATGAGGGGCCCTTTAGGACGCAGTTTTCGGGAGTTTTAGGTCTCGGACGAGGTCCACTTTCAATGCAAAGTCAACTTCATGCCAAGGCCTTTTCCTTCTGCGTGGTGAGTGTTGGATCGGAGAAACCTTCGTCTCTGGAGTTTTATGAGACACTGCCCAAACAACATGGTAACACTAACAAATCCATTATGGTACCCTTAAGAGAGAACAGTAGATACCCTTTCGATTACTTTGTGCAGCTTGTGGGAATAGGCATTAACGGGTTCATGTTGGATATTCCATCTAGGGTTTGGGGTTATGGCTTGAACTACGATGGTGGGGTTGTTATAGACACCGGAAAAGTGCTAACCTATTTGCCTAGTGAAGCTTATAGTGCATTCAGGTCGGAGATGCTTAGAACAGATGGTAACTTTACAGAGAAGAAAGGATATGGGGAGTTAGAGTTTTGTTACGTAGAAAGTCCTACTAATGTGTATCCAACAGTTGAGTTTTACTTTGAAAACGGTAACATTGCGGGTGAAAATATCGTGTCATTCAAGTTGAACAACCGGCAATTGCTCATCACACCACAGGAGGGAATAGTTTGTCTATCGTTTGCAGAAGCAAAAGACTCTGCACTTACTGTTATTGGCACTAACCATCTCCAAGGAACTCTGTTAACGTATAATTTGGTTGATGAGATTATTATTTTCACATATAATAACTGTTAG 1152 0.4453 MVKHETVMEHEEANAEATADIFPADDAYAMFLWVGTPVQILFLLIHTGSPITWFQCGPCTHCYPMHRPLFNSRASTSFRQLGCYSDTCLIPMMRGIFGNCTGRSCRYSVEYDMKSQSRSFGVMVTDTLNFEHSNVEVKDFVMGCGNSYEGPFRTQFSGVLGLGRGPLSMQSQLHAKAFSFCVVSVGSEKPSSLEFYETLPKQHGNTNKSIMVPLRENSRYPFDYFVQLVGIGINGFMLDIPSRVWGYGLNYDGGVVIDTGKVLTYLPSEAYSAFRSEMLRTDGNFTEKKGYGELEFCYVESPTNVYPTVEFYFENGNIAGENIVSFKLNNRQLLITPQEGIVCLSFAEAKDSALTVIGTNHLQGTLLTYNLVDEIIIFTYNNC 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00850 383 Pfam Xylanase inhibitor N-terminal 28 193 IPR032861 -
Viun9g00850 383 Gene3D Acid Proteases 5 195 IPR021109 -
Viun9g00850 383 SUPERFAMILY Acid proteases 25 383 IPR021109 -
Viun9g00850 383 ProSiteProfiles Peptidase family A1 domain profile. 28 379 IPR033121 -
Viun9g00850 383 PANTHER ASPARTYL PROTEASES 4 372 IPR001461 GO:0004190|GO:0006508
Viun9g00850 383 Pfam Xylanase inhibitor C-terminal 223 379 IPR032799 -
Viun9g00850 383 Gene3D Acid Proteases 202 383 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00850 Viun-Chr9 6411479 6412630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00850 28 383 Miscellaneous Gene Families AT1G77480 24.011 5.88e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00850 - K22683 var:108330182 729.939