Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00800 ATGAAGGAGGTGCTGTTGGGTGGGGGAGATAAGATTGAGAGGAAGAAAGCGAGGGTGGTTTGGGAAGGGTTGATGATGATGGGTCTCAAAGGGGAGAGTAACAACAAGCTGAGGAATTCGATGGTGGTGTCATCCTCGTCGTCGAGGTCGTCGAGGATGAAGCTGTGGATGATACGTGCGACCACATCGGTGTTGCTATGGACCTGCGTCGTTCAGTTAACGGCGTTGGGTGACATGTGGGGGCCTAGAGTCTTGAAGGGGTGGCCTTCGTGTTTCACGTACGAATCTGCGCTCACTGAGTTGCCGTCTTCTACCCCCGTAGTGCTCCCACCCAAGAGGGTGTATAAGAACAATGGTTACTTGATGGTGTCGTGCAATGGAGGACTGAACCAAATGAGAGCAGCGATATGTGACATGGTGGCTATTGCAAGGTATTTAAACGTGACACTTATAGTGCCTGAATTGGATAAAACGTCCTTTTGGGCTGACCCCAGTGAGTTCCAAGACATCTTTGATGTGGATCATTTCATTACATCCTTGAGGGATGAGGTTCGGATATTGAAAGAGTTGCCTCCTAGACTGAAGACGAGAGTGGAGAAGGGATTACTTTACACCATGCCACCGATTAGTTGGTCTGATATATCATACTATAAGAACCAGATTCTACCTTTGATACAAAAGTACAAAGTCGTCCATTTAAATCGAACAGATGCTCGGCTGGCCAATAACGAACAACCTTTGGAGATTCAGAGGCTGCGATGCAGAGTCAATTTTAGTGCTCTTAGATTTACTTCTCAGATTGAGGACTTAGGCAAAAGGGTGATCAAGCTTCTGAGGCAAAATGGCCCATTTCTGGTGCTTCATCTCAGGTATGAAATGGACATGCTGGCATTTTCAGGCTGTACACAAGGTTGCAACAGTGATGAGGTGGAAGAGTTGACGAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAGAGAAAGGATGGTTTGTGTCCTTTAACACCTGAGGAGACTGCTCTTACACTTAGGGCCCTTGACATCGATAAAAACATTCAAATCTACATTGCAGCTGGGGAAATATACGGTGGAAACAGGAGAATGGCAAGTCTTGCCGAGAACTATCCAAGATTGGTCAGAAAGGAAACACTGTTGGAACCGTCGGACCTTCAGTTCTTCCAAAATCATTCCTCTCAGATGGCAGCATTAGATTACCTTGTCTCACTAGAGAGTGATATTTTTGTTCCTACATATGATGGAAATATGGCCAAAGTAGTCGAGGGACATCGCAGATATCTTGGGTTCAAGAAGACGATTTTGTTGAACAGAAAGCTTCTAGTTGATTTGATAGATCAATACCACAATGGAGAATTGAACTGGGAGGAATTCTCTACAGCGGTGAAGCAAGCCCATGCTGATCGCATGGGCAGTGCAACTAAAAGATTGGTAATCCCTGACAGGCCCAAGGAAGAAGATTATTTCTACGCCAATCCAGAAGAATGTTTAGAACTATCAGATGGTATGTTGAGCAGTACGTGA 1560 0.4494 MKEVLLGGGDKIERKKARVVWEGLMMMGLKGESNNKLRNSMVVSSSSSRSSRMKLWMIRATTSVLLWTCVVQLTALGDMWGPRVLKGWPSCFTYESALTELPSSTPVVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKTRVEKGLLYTMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNEQPLEIQRLRCRVNFSALRFTSQIEDLGKRVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDIDKNIQIYIAAGEIYGGNRRMASLAENYPRLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVDLIDQYHNGELNWEEFSTAVKQAHADRMGSATKRLVIPDRPKEEDYFYANPEECLELSDGMLSST 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00800 519 Pfam GDP-fucose protein O-fucosyltransferase 120 440 IPR019378 -
Viun9g00800 519 PANTHER OS02G0726500 PROTEIN-RELATED 47 509 - -
Viun9g00800 519 PIRSF UCP009360 21 506 IPR024709 -
Viun9g00800 519 CDD O-FucT_plant 120 445 IPR024709 -
Viun9g00800 519 FunFam O-fucosyltransferase 28 255 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00800 Viun-Chr9 5977660 5981570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00800 116 509 Miscellaneous Gene Families AT2G37980 50.253 4.50e-133 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00800 K23280 - gmx:100778901 941.028