Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00614 ATGGCGGAGGAAGGGGAAGAAACGAAGAACGCTGTCAGAGTATTCGTGGGAGGATTGGCGGAAACCGTCAGTGCCGAAGACCTTCGAAGCTTATTCTCCTCTCTTGGTTCCGTCCAAGCCGTTCAAACCATCCGAACTAAAGGTCGCAGCTTTGCCTACATCGATTTTCACTCCGATCCTAAATCCCTTTCCAAACTCTTCAGCAAGTATAATGGGTGTCTATGGAAGGGTGGAAGGCTGAGACTGGAGAAGGCCAAAGAAGACTATCTCACGAGGATGAAGAGAGAATGGGAGCACGATGCTCTTGATGATGCTACTCAACCACCTCCCAGTTCTCCTAAGGAAGCCACCACACACTCTTCTAAGTCAAATACCAAACATCTCAGTATTTTCTTTCCTAGATTGAGAAAGGTGAAATCCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTCCAGAATATTAAAGTTCCTCCACTCCCTGTGCATTTTTGTGATTGTGAGGAGCATTGTAGTCCCGTTATCACGGAAAGAGGGAAGCTATCTATTGATGGGGGAGCTGAAAGTGGTGGAATGAATGATGAAGAGATTAGCATAATGAATTCTGTGATGAACAAGCTACTTCAAAAAGAAAAGGTTTCCAGTGTTGAGAACCTTGGAAAGGAGAAGGATTTGTGCAAGTTACCTGATACTTTACAATCTGATGAATGTGAAGATAGCGCAACAGATGAAGACGATCTCATTATTAACATGGAGACGAATAGAAATAAAACAGCTTTAATAGGGAACCAGGAGCTCGAAAGAATCCTGGAAAATCAGGAATCATGGTTTAATAAAACAAAAATTGCTAAGGAAGATCACAACAATAGTACGCCTCAAGTGGAGAGAAGGAATAATACCAATCCCAACAAGAACAAGAAGAGGAAATCACTTCCCAAATTGGAAATGGAAAGTAATGCAGAAGTATCAGCAACCCCTGGTGGCAAGGGTAATAAGCAGACTATTCCAAATAAGGTGGGATCTGGTGCACAGCGTAGTGAGCCAGAAGATGGTTTTGAGGAATTGACTAAAGTATCATGGTCTCAAAAGTCTTCATGGAAAGAACTTCTTGGTGGTGGAGGAAATACTTCTTTCAGTGCTTCTGTTATATTACCAAAGTTGGACTCTAGTAAGAATCAAGAAAGATCCTATGATCTGTGTGCACCTGTATCTACAATCAGTAAAACTGAAAACATGGAAAAGGACAGAGAATTATGGAGCAACCCTACCAATACGCAAGCGATAAAAGAGCATGCTGATGCTCAACCTACCGATACACAAGTGATTAAAGAGCTTGCTGAAGCTCAACCTGCAAATAAAGAAGTGATAGAAGATGTTACCGAAAATCAGCATAATGTGGCACCTAATAAGACAGGCAGAGGAGCTTCATGGCTGCAAAAACAATCCTGGACACAAATGGTTAGTGAGAATAGCAATTCATTTAGCATTTCACATATTTTGCCTGGTATTACTTTTCCAGAGCCAAAGGCCAAGGAACCCATTGTGGTACCTGCCATTTCCAATCAATCCAAGCATAATGGTGTACCCAAGGATACTATTAATGAAGCTGTGAGTAATGACGGGTTTAATTCAAAGGAGGCTGTACAAGAAAAGAGTCAGCATATCAGTGCCAATGACGTTACTTTTGCTTCAGTAGTTGAGGAAAAAGTTGAAACAAATCCCAGGGAAAAATCCCCTGAAAATATTGAAATAGGTGAAACGTGCACATTTATGAGAAGTGCTGCATCTTTGAAGGAATGGGCAAAAGCTAAGACCGCTATTAGTGGATCACTCAAAAGAAAAAGTGGTGAGAGGTAA 1860 0.4151 MAEEGEETKNAVRVFVGGLAETVSAEDLRSLFSSLGSVQAVQTIRTKGRSFAYIDFHSDPKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLTRMKREWEHDALDDATQPPPSSPKEATTHSSKSNTKHLSIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPPLPVHFCDCEEHCSPVITERGKLSIDGGAESGGMNDEEISIMNSVMNKLLQKEKVSSVENLGKEKDLCKLPDTLQSDECEDSATDEDDLIINMETNRNKTALIGNQELERILENQESWFNKTKIAKEDHNNSTPQVERRNNTNPNKNKKRKSLPKLEMESNAEVSATPGGKGNKQTIPNKVGSGAQRSEPEDGFEELTKVSWSQKSSWKELLGGGGNTSFSASVILPKLDSSKNQERSYDLCAPVSTISKTENMEKDRELWSNPTNTQAIKEHADAQPTDTQVIKELAEAQPANKEVIEDVTENQHNVAPNKTGRGASWLQKQSWTQMVSENSNSFSISHILPGITFPEPKAKEPIVVPAISNQSKHNGVPKDTINEAVSNDGFNSKEAVQEKSQHISANDVTFASVVEEKVETNPREKSPENIEIGETCTFMRSAASLKEWAKAKTAISGSLKRKSGER 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00614 619 MobiDBLite consensus disorder prediction 283 355 - -
Viun9g00614 619 CDD RRM_NOL8 13 86 IPR034138 -
Viun9g00614 619 Gene3D - 2 91 IPR012677 -
Viun9g00614 619 PANTHER TRANSCRIPTIONAL REGULATOR 1 617 - -
Viun9g00614 619 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 59 IPR000504 GO:0003723
Viun9g00614 619 SMART rrm1_1 13 83 IPR000504 GO:0003723
Viun9g00614 619 MobiDBLite consensus disorder prediction 325 342 - -
Viun9g00614 619 MobiDBLite consensus disorder prediction 101 124 - -
Viun9g00614 619 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Viun9g00614 619 MobiDBLite consensus disorder prediction 110 124 - -
Viun9g00614 619 SUPERFAMILY RNA-binding domain, RBD 3 86 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00614 - - vum:124830427 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00614 9 4655848 4659863 Viun9g00614 9 4655848 4659863 ECH