Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00613 ATGGAAGGAGGAGGAGTGCGAAAGAGGAGTTGTTGCAGCATTCAGAAAAATGACTTCCTGCCGGAGGAGTCGTTCAAGAGCTGGGGGAACTACACGACGGCGCTGCGGGAGACGCCGGCGAGGCTGAAGGACCGATTCCTCACGCGATCCAGCGAGCAAGTGGAGATCAGCGAGATGACGGCGCGTAGCAGCCACCAGATGAAGAAGACGCTCAACTGGTGGGACCTCATCTGGCTCGGCGTCGGCTCCGTCGTCGGCGCCGGAATATTCGTCCTCACCGGATTGGAGGCTAGGAACGTCGCTGGTCCCGCCGTCATCTTGTCCTACGTCGTCTCCGGTTTTTCCGCCATGCTGTCCGTCTTCTGTTACACCGAGTTTGCCGTCGAAATCCCTGTTGCCGGTGGTTCATTTGCCTACTTAAAAGTGGAGCTAGGAGACTTTGTGGCCTTCATAGCCGCAGGAAACATTCTTCTGGAGTACGTAATAAGTTGTGCCGCAGTAGCAAGGTCATGGACCTCTTACTTCGCCACCCTCTGCAACAAAAACCCCGATGATTTTCGCATAGTTGTGCATAACATGAACCCCGATTATGGCCACCTTGACCCTATAGCTGTTGCCATCCTTGCACTCGTATGCGTCATGGCGGTTTGCAGCACCAAAGCCTCTTCAGTATTCAACTACGTTGCCTCAGTCATACACGTAGTCATCATCGTCTTCATAGTCATAACAGGTCTCATCCACGCCAAGCCTCAAAACTACGTACCCTTTGCACCCTTCGGTGTTAGGGGCGTGTTCCAAGCTTCAGCTGTGCTCTACTTTGCCTATGTGGGGTTCGATGCTGTTGCAACCATGGCCGAAGAGACCAAGAACCCTTCAAGGGACATTCCAATTGGGCTTGTAGGCTCAATGCTGATAGCCACATTGGCATATTGCTTGCTTGCAGCCACACTGTGCCTCATGCAACCGTATACCAATATCGACGTGAATGCACCCTTTTCGGTTGCGTTCAGTGCCATTGGGTGGGATTGGGCGAAGTACATTGTTTCATTGGGGGCATTGAAGGGAATGACCACGGTGTTGTTGGTGACTTCTGTGGGTCAAGCTCGATATCTGACTCACATTTCACGTACACACATGATGCCTCCTTGGTTTGCTTTTGTGGATGAGCGCACCGGAACACCCGTGAATGCCACAATTTCGCTGGTTCTTATCTCAGCTGTGATTGGTTTCTTCACTGAACTGGAGGTTCTCTCTAACCTCTTGTCAATTTCCACTCTCTTCGTCTTCACGTTGGTGGCAGTTGCTCTCCTTGTGCGTAGGTACTACTCCAGTGGAGTCACAACGAAGGGGAACCAGATGAAGCTCATTGTGTTCATTGTGGTCATCGTTGGTTCTTCATGTGGGATTTCATCTTATTGGGCACTGAGTGATGGTTGGATTGGTTATGCTGTTCTTTGTCCAATTTGGGTTTTGGGTACAGGAGGGCTTTGGCTGGTTGTTCCACAGGCAAAGGAGCCAAAACTTTGGGGGGTGCCTCTGGTTCCATGGCTACCTTCCATATCTATCTTTGTTAACATATTCCTCCTTGGATCTATTGATAAGGATTCGTTTGTTAGGTTTGGTGTTTGGACTCTGCTTCTCTTGGTTTACTATATCCTCTTCGGGTTGCATGCTTCTTATGACACAGCTAAGGAGTTTGAGGCACAGCGTTGTGTCCAAAGGGAGTTGAACAGCTTGGAAGATGGGGCGGTGTCTTCTACTACGTAG 1767 0.5065 MEGGGVRKRSCCSIQKNDFLPEESFKSWGNYTTALRETPARLKDRFLTRSSEQVEISEMTARSSHQMKKTLNWWDLIWLGVGSVVGAGIFVLTGLEARNVAGPAVILSYVVSGFSAMLSVFCYTEFAVEIPVAGGSFAYLKVELGDFVAFIAAGNILLEYVISCAAVARSWTSYFATLCNKNPDDFRIVVHNMNPDYGHLDPIAVAILALVCVMAVCSTKASSVFNYVASVIHVVIIVFIVITGLIHAKPQNYVPFAPFGVRGVFQASAVLYFAYVGFDAVATMAEETKNPSRDIPIGLVGSMLIATLAYCLLAATLCLMQPYTNIDVNAPFSVAFSAIGWDWAKYIVSLGALKGMTTVLLVTSVGQARYLTHISRTHMMPPWFAFVDERTGTPVNATISLVLISAVIGFFTELEVLSNLLSISTLFVFTLVAVALLVRRYYSSGVTTKGNQMKLIVFIVVIVGSSCGISSYWALSDGWIGYAVLCPIWVLGTGGLWLVVPQAKEPKLWGVPLVPWLPSISIFVNIFLLGSIDKDSFVRFGVWTLLLLVYYILFGLHASYDTAKEFEAQRCVQRELNSLEDGAVSSTT 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00613 588 PIRSF AA_transporter 453 570 - -
Viun9g00613 588 PIRSF AA_transporter 48 508 - -
Viun9g00613 588 FunFam Cationic amino acid transporter 5 65 499 - -
Viun9g00613 588 Pfam Amino acid permease 71 460 IPR002293 GO:0016020|GO:0022857|GO:0055085
Viun9g00613 588 Gene3D Amino acid/polyamine transporter I 65 502 - -
Viun9g00613 588 Pfam C-terminus of AA_permease 509 559 IPR029485 -
Viun9g00613 588 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 46 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00613 Viun-Chr9 4570985 4573930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00613 1 565 Organic Solute Cotransporters AT2G34960 58.201 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00613 K03294 - gmx:100785573 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00613 9 4570985 4573930 Viun9g00613 9 4570985 4573930 ECH