Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00611 ATGGAGGTGTCGTCGGAGCCGTCTGGCGAAGATGTGGCGCCGGAAAAGCCTCTGAGTTCTCCGAAGAAGAACGTTCCTGAAGCTTCCAGGAGAGCTGCGAAAACTGCCGCAGACCCTGGCGGTCCGGCGAAAAGGAAAGTTGAACCGCGAACTGGTTCGAGTGCCGGTGCCGGCACGGTTGCGGCGAGGAGATCGGGTTCAGTCGGTGGTTCCGCGAGTTCGGTTTCCGCGCCGAGACGGAACAGTACTGGAGGATTGTCTCAGAAGTCGTCGATCTCTGTTGCAGGGAGGAAAGCCGGTGCTGAGTCTGTTGGTGGCGGTAAGAGCAGCGTTTCGTCGGCGAGTGAACCTATCCGAAAGTCTCTGCCGGAGCTCCGGCGTAATTCTGTAACTTCTTCACGTTCGGCGAATCCGGTTGCGGCCTCGCCGGTTGGCTCGGCTTCTAGGACTTCTGGTGCGAGTAAGGCGGAGGTTGCGAGGAAGCCGGTGAGTAAGCTGGCATTGTCGGCTTCGGGTTCGGCTTCGTCTGTTTCGAGAAGGATAAGTTCTTCTTCGGTGGATAGCACTGCCAGCAGTGGAGGTTCTGCTCGAAGGACGGTTTCCAGGGTTTCTTCGCCGACGGTTTCCAGCGGGTTGAAGGCGGGCTCTCTGTCCACATCGCAGGATAGAGCTTCTGCACTTTCTGGAAGGAGAAAGGGAGGCACTCCTGATAGCCGGGATTCGCGGTTTATTGCGCTCCCGCATGTTGAGATTAAGGCCAATGATGACTTGAGACTGGATCTAAGGGGACACAGAGTTCGCAGTCTCACTGCCAGTGGATTAAACTTATCCTCAAACTTAGAGTTTGTTTATCTCCGAGACAATCTCTTGTCTACACTGGAAGGAGTAGAAATATTGACTAGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAGGGGCCTGGATTTGAGCCTCTTGAGAATTGCAGAGTACTGCAGCAACTCTATCTTGCTGGAAATCAAATTACATCATTGGCAAGTCTCCCTCAACTTCCTAATTTGGAGTTCCTTTCAGTAGCTCAGAATAAGTTGAAGTCTCTTACTATGGCTAGCCAACCTCGACTGCAGGTCTTAGCTGCCAGCAAAAACAAAATTTCTACTCTTAAGGGTTTCCCGTATTTACCTGTTCTTGAGCATTTGCGAGTAGAGGAGAATCCTATACTTAAGATGCTTCATTTGGAAGCAGCCTCAATATTGCTAGTTGGACCTACATTGAAAAAGTACAACGACAGAGATCTCTCTCGTGAGGAAGTGGCTCTAGCAAAGCGTTATCCTGCACATACAGCTTTATGCATTAGGGATGGTTGGGATTTCAGTCGCCCTGATCAAGCTGCAGACTCAACTTTCCGCTTTTTAGTTGAGAAATGGAAAGACCATATTCCTCCTGGTTTTCTCCTCAAAGAAGCCTCCATAGACAAACCTGTGGAAGAAGATATGTGTCGTTGTCACTTCACCATTATTCCCGATGGTGCAGCTAGTACAGGCCCCCCATTAGATTTAAAATATCAATGGTTTTGTGGTGATTTATCGCTTGCAAATTTTGTCCCTATTCCAGATGCTACCAGTGAGGTTTACTGGCCGAAGCATGACGACATTGGAAAAGTTCTGAAGGTGGAATGCACACTCACTCTAGAAGAAATGACATATCCTCCTATATTTGCCATCTCACCTCGTATTTCGCGAGGAAATGGAATTCCAAAGGTTGTAGATCTTGAAGTACATGGGGAACTGGTTGAAGGAAGTATCATCAGGGGTTGTGCTAAGGTTGCTTGGTGTGGTGGAACTCCAGGAAAAGGTGTTGCTAGTTGGTTACGGAGAAAGTGGAATAGCAGTCCTGTGGTCATTGTTGGGGCAGAAGATGAAGAGTATAAGTTAACCATTGATGATGTTGATTCAAGTTTAGTTTTCATGTACACACCTGTAACAGAAGAAGGTGCGAAGGGAGAACCTCAATACAAATATACAGATTTTGTAAAAGCTGCTCCTCCTTCTGTCAGTAATGTGAAAATAGTTGGAGATGCTGTTGAGGGAAGTACCATCAAAGGAGTCGGAGATTACTTTGGTGGAAGGGAGGGCCCGAGCAAGTTTGAATGGTTGCGGGAGAGCATGGATTCTGGAGGCTTGTTGTTGGTGTCAGCAGGCACATCTGAGTATACCTTGACCAAAGAGGATGTTGGTTGTTGTGTGGCGTTTGTGTACATACCCATTAATTTTGAGGGTCAGGAAGGAAAATCTATGTCTGTAATGTCTCCTGTTGTGAAACAAGCACCTCCAAAGGTAACAAATCTCAAAATAATTGGTGAACTACGAGAGAATAGCAAGGTCACTGCAACTGGTATTGTAACTGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTATAAAACACATTCGTCAACTTTGGATGAAAACAGTCTTGAAGCATTAAGTACTTCTAAAATTGCCAAAGCATTCCGCATACCTCTTGGAGCTGTGGGCTATTACATTGTGGCAAAATTTATTCCCATGACTCCTGATGGTGATTCTGGAGAACCAGTGTTTGTAATATCTGATAAAGCAGTGGAGACTCTTCCCCCAAGCTTGAATTTCTTATCTATCATTGGGGATTACAACGAAGATGGAATTTTGACAGCTTCATATGGATATGTTGGAGGTCATGAAGGAAAGAGTATTTACAGTTGGTATATTCATGAGGTTGAAGGTGATTCAGGTTCTCGGATACCAGGGATTTCGGGACTGCAGTACCGCATCACCAAAGAAGCCATTGGAAAATTCATCTCATTCCAGTGTACTCCAGTACGGGATGATGGCGTTGTTGGTGACACAAGAATTTGCATGGGCCAGGAGCGCATTCGCCCTGGAAGCCCAAGATTGCTTTCTTTACACATAATTGGAAATGCTGTTGAAGGAACAATTCTAAGAATTGAAAAAAAGTATTGGGGTGGTGAAGAGGGAGATTCAGTTTGCCGCTGGCTTAGGACCACTCCTGATGGCACAAAAAAAGAAATTGCGGGTGCCACTGATGCATCATATATGCCCTCAATCGATGACATTGGCTCCTTTATTTCTGTTTCATGCGAGCCTGTTCGAAGTGATTGGGCTCGTGGACCTATGGTTCTGTCTGAACAAATTGGGCCTATAATACCTGGTCCCCCAACTTGTCACACCCTGGAATTTGTTGGATCAATGATAGAAGGGCAGCACTTAAGCTTTAATGCTGTGTATACTGGAGGGGAGCAAGGAGATTGTACCCATGAGTGGTTTAGGGTAAAAGACAATGGTGTTCGAGAGAGAATAAGTAGCAAAGACTTTTTGGATTTGACTCTTGAGGATGTTGGTGCGTGCATTGAAATAATCTATACTCCTGTGCGCAAAGATGGAATCAAAGGCAACCCAAAGCACATTGTGTCTGATCTGATTTCTCCTGCGGATCCTAAGGGAATAGAACTCTTAATTCCTGAATGTTGTGAAGACAGAGAGCTTATGCCACTGAGAAAATATTTTGGTGGACATGAGGGGATTGGAAAGTATACTTGGTATTGTACAAAGCGTAAACTTGAAGGATCTGAACTGCTAGATATAACTAATGCCTCTGATGTTGTGATATCTGGGACAGAGCTAATGTATAAACCGCTACTTAAAGATGTTGCATCTTACTTGGCTTTGTATTGGGTGCCTACTCGAGCAGATGGAAAATGTGGGGAGCCATTGGTTGCAATTAGCAGTGCCCCAGTTTCCCCCGCTCCTCCAGTAGTTTCTAATGTACACGTGAAAGAGTTGTCAACGGGAATTTATTCCGGAGAAGGTGAATATTTTGGTGGACATGAAGGAGAAAGTCTCTTTAGCTGGTATAGAGAAAATAACGAGGGAACCATTGAACTAGTTAATGGAGCAAATTCTAAAAGCTATGAAGTTACTGATTCAGATTACAGTTTTCGGTTGTTGTTTGGATATACACCAATTCGTTCAGATTCGGTTGTGGGAGAGCTTGTTTTATCTGCTCCGACTAATATTGTGTTCCCAGAACTTCCATGTGTCGAGATGCTTGCTCTGACTGGAAAGGCAGTTGAAGGTGATGTTCTTACAGCTGTTGAAGTGATTCCAAATAGTGAGACACAGCGACATGTTTGGAGCAAGTACAAGAAAGATATAAGATATCAATGGTTTTGTTCGTCTGAAGTTGGAGACAGTCTTTCGTATGATCCATTACCAAATCAGAATTCTTGTTCCTATAAGGTGCGGCTAGAGGATATTGGTCATCATTTAAAATGTGAGTGTATCGTAACTGATGTGTTTGGAAGGTCTGGTGAGGCAGTATGCATTGAGACAACACCTGTGTTGCCAGGAATTCCTAGAATACACAAGCTGGAGATTGAGGGAAGGGGATTTCATACCAATCTCTATGCTGTTCATGGCATTTATAGTGGTGGAAAGGAAGGCAAAAGTAGGGTTCAGTGGCTTAGATCTATGGTTGGAAGTCCTGACCTGATCTCCATACCAGGCGAAACTGGCAGAATGTATGAAGCGAATGTTGATGACGTTGGTTATAGGCTAGTGGCGATCTATACTCCTGTAAGAGAGGATGGAGTAGAGGGGCAATCAATTTCTGTATCCACAGAGCCAATAGCTGTTGAGCCCGATGTTCTTAAAGAAGTGAAGAACAACCTTGAACTTGGATCAGTGAAGTTTGAGGTATTATGCGACAAAGACCAAACCTCAAAAAAGATTTCATCAGTGGGCACATACGAGAGACGTATCCTTGAAATTAACAGGAAAAGGGTAAAGGTGGTAAAGCCTGCCACGAAGACTTCTTTTCCAACTACAGAACTTCGTGGTAGTTATGCCCCTCCATTTCATGTGGAGCTTTTCAGGAATGATCAACACCGTCTTAAGGTTGTAGTGGACAGTGAGAATGAAGCAGACTTGATGGTGCACTCCCGACACATTCGGGATGTTATTGTTCTTGTGATTCGAGGACTTGCTCAGCGATTCAATAGTACTTCCCTCAATTCTCTTCTCAAGATAGACACATAA 5076 0.449 MEVSSEPSGEDVAPEKPLSSPKKNVPEASRRAAKTAADPGGPAKRKVEPRTGSSAGAGTVAARRSGSVGGSASSVSAPRRNSTGGLSQKSSISVAGRKAGAESVGGGKSSVSSASEPIRKSLPELRRNSVTSSRSANPVAASPVGSASRTSGASKAEVARKPVSKLALSASGSASSVSRRISSSSVDSTASSGGSARRTVSRVSSPTVSSGLKAGSLSTSQDRASALSGRRKGGTPDSRDSRFIALPHVEIKANDDLRLDLRGHRVRSLTASGLNLSSNLEFVYLRDNLLSTLEGVEILTRVKVLDLSFNDFKGPGFEPLENCRVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNKISTLKGFPYLPVLEHLRVEENPILKMLHLEAASILLVGPTLKKYNDRDLSREEVALAKRYPAHTALCIRDGWDFSRPDQAADSTFRFLVEKWKDHIPPGFLLKEASIDKPVEEDMCRCHFTIIPDGAASTGPPLDLKYQWFCGDLSLANFVPIPDATSEVYWPKHDDIGKVLKVECTLTLEEMTYPPIFAISPRISRGNGIPKVVDLEVHGELVEGSIIRGCAKVAWCGGTPGKGVASWLRRKWNSSPVVIVGAEDEEYKLTIDDVDSSLVFMYTPVTEEGAKGEPQYKYTDFVKAAPPSVSNVKIVGDAVEGSTIKGVGDYFGGREGPSKFEWLRESMDSGGLLLVSAGTSEYTLTKEDVGCCVAFVYIPINFEGQEGKSMSVMSPVVKQAPPKVTNLKIIGELRENSKVTATGIVTGGTEGSSRVQWYKTHSSTLDENSLEALSTSKIAKAFRIPLGAVGYYIVAKFIPMTPDGDSGEPVFVISDKAVETLPPSLNFLSIIGDYNEDGILTASYGYVGGHEGKSIYSWYIHEVEGDSGSRIPGISGLQYRITKEAIGKFISFQCTPVRDDGVVGDTRICMGQERIRPGSPRLLSLHIIGNAVEGTILRIEKKYWGGEEGDSVCRWLRTTPDGTKKEIAGATDASYMPSIDDIGSFISVSCEPVRSDWARGPMVLSEQIGPIIPGPPTCHTLEFVGSMIEGQHLSFNAVYTGGEQGDCTHEWFRVKDNGVRERISSKDFLDLTLEDVGACIEIIYTPVRKDGIKGNPKHIVSDLISPADPKGIELLIPECCEDRELMPLRKYFGGHEGIGKYTWYCTKRKLEGSELLDITNASDVVISGTELMYKPLLKDVASYLALYWVPTRADGKCGEPLVAISSAPVSPAPPVVSNVHVKELSTGIYSGEGEYFGGHEGESLFSWYRENNEGTIELVNGANSKSYEVTDSDYSFRLLFGYTPIRSDSVVGELVLSAPTNIVFPELPCVEMLALTGKAVEGDVLTAVEVIPNSETQRHVWSKYKKDIRYQWFCSSEVGDSLSYDPLPNQNSCSYKVRLEDIGHHLKCECIVTDVFGRSGEAVCIETTPVLPGIPRIHKLEIEGRGFHTNLYAVHGIYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGVEGQSISVSTEPIAVEPDVLKEVKNNLELGSVKFEVLCDKDQTSKKISSVGTYERRILEINRKRVKVVKPATKTSFPTTELRGSYAPPFHVELFRNDQHRLKVVVDSENEADLMVHSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIDT 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00611 1691 PANTHER EXPRESSED PROTEIN 651 760 - -
Viun9g00611 1691 FunFam Predicted protein 228 408 - -
Viun9g00611 1691 MobiDBLite consensus disorder prediction 125 153 - -
Viun9g00611 1691 MobiDBLite consensus disorder prediction 1 241 - -
Viun9g00611 1691 ProSiteProfiles Leucine-rich repeat profile. 325 346 IPR001611 GO:0005515
Viun9g00611 1691 FunFam 187-kDa microtubule-associated protein AIR9 971 1054 - -
Viun9g00611 1691 Gene3D - 874 958 - -
Viun9g00611 1691 Gene3D - 971 1049 - -
Viun9g00611 1691 Gene3D - 499 566 - -
Viun9g00611 1691 Gene3D - 1358 1453 - -
Viun9g00611 1691 SUPERFAMILY Outer arm dynein light chain 1 258 409 - -
Viun9g00611 1691 FunFam 187-kDa microtubule-associated protein AIR9 874 958 - -
Viun9g00611 1691 ProSiteProfiles Leucine-rich repeat profile. 279 300 IPR001611 GO:0005515
Viun9g00611 1691 MobiDBLite consensus disorder prediction 66 94 - -
Viun9g00611 1691 Gene3D Ribonuclease Inhibitor 248 316 IPR032675 -
Viun9g00611 1691 Gene3D Ribonuclease Inhibitor 317 443 IPR032675 -
Viun9g00611 1691 MobiDBLite consensus disorder prediction 168 226 - -
Viun9g00611 1691 FunFam 187-kDa microtubule-associated protein AIR9 isoform X2 1358 1453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00611 Viun-Chr9 4527227 4553435 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00611 - - pvu:PHAVU_009G217700g 3037.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00611 9 4527227 4553435 Viun9g00611 9 4527227 4553435 ECH