Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00600 ATGGCGGCTTCTGATCCCAACAAGTTGCTCGCCAAAGCTGATAAGCTAACAACACTCAGTCTCACGAGGTGGAATGCGGATTGGAAAAGTGCTACTGCTCTTTATGAGCAGGCAGCTAATGGGTTTCGAGTTGCCAGGAACCATGAGAAAGCCAAAATAGCATTTGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCATCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCAGCTTTGGCAAAGGATTTAAGTAATTGGCAGGAAGTTGGGGACTTCTATCGAAAGGCATCTGAATTGTACATGGAGTGTTCGAGACCACAACCTGCATCAGATGCCCTTGCAAAGGCAGCCCGTGCTTTGGAAGATAGCATGCCTGAAGAAGCGATTCAGCTATATACAGATGCTTGTACAACTCTTGAAGACGATGGAAGAGACCAAATGGCCTTTGACCTATATCGTGCTGCTGCTAATGTTTATATAAAACTTCAAAAATATACAGATGCAGCATCTTTCATGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAATAGCCAGAGCAAGGCATATCTCAGTGCAATTGTTATCTACCTTTATGCCGATGACTTTAATCAAGCTGAGAAGTGCTATAATGACTGTTCTCAGGTTGATGCTTTTCTCAGAAGTGACCAGAATCGTTGTGCTAGCAAGCTACTTGCTGCCTACAGAGATGGAGATGTTGAAGAAATCAAACGCATTGCTCAGTCTAGTGGTATTTCACATCTTGACCATGTGATCATTAGGCTTGCGAGGAAACTTCCTACAGGTGACGTGAGTGCATTAAAGGCTAAGAATGCTGCTGAAGAAGATGATGAACTTGATGAAGACGACCTCACTTAA 891 0.4388 MAASDPNKLLAKADKLTTLSLTRWNADWKSATALYEQAANGFRVARNHEKAKIAFEKASKGQEMLSSPWDAAKHMESAAALAKDLSNWQEVGDFYRKASELYMECSRPQPASDALAKAARALEDSMPEEAIQLYTDACTTLEDDGRDQMAFDLYRAAANVYIKLQKYTDAASFMLRLGLAADKCNATNSQSKAYLSAIVIYLYADDFNQAEKCYNDCSQVDAFLRSDQNRCASKLLAAYRDGDVEEIKRIAQSSGISHLDHVIIRLARKLPTGDVSALKAKNAAEEDDELDEDDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00600 296 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
Viun9g00600 296 FunFam Gamma-soluble NSF attachment protein 3 272 - -
Viun9g00600 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 275 IPR000744 GO:0006886
Viun9g00600 296 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Viun9g00600 296 Pfam Soluble NSF attachment protein, SNAP 5 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00600 Viun-Chr9 4417683 4425742 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00600 K21198 - gmx:100776112 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00600 9 4417683 4425742 Viun9g00600 9 4417683 4425742 ECH