Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00585 ATGGTCCCAATCAATTCAGCGTTGAGAGGTCCCAATTTTCATTTCTCATCGTCAACAATAAGTCTCAGATTTAAGGGCTCGTACCTCCAAAACCAGATTTTCATGGCTGCCAAGAAGGCATGTGAGTCATTCTCAAAGTCTTTGATTGAGGAAGTGCATAGATGGGGTTGCTTGAAGCAGACAGGGGTAAGTCTGAGGTACATGATGGAGTTTGGGTCCAAACCCGTTAACAAGAATTTGTTGATTTCTGCTCAGTTTCTTCACAAAGAGCTAGCCATTAGAATTGCCAGAAGAGCTATTGAGCTTGAGAATCTTCCCTATGGTTTGTCTCAAAAGCCTGCTATTTTGAAGGTTAGGGATTGGTATCTGGATTCATTCCGTGATCTCAGAGCCTTCCCTGATATCAAGAATATGAACGATGAAAGGGAGTTCACTGAAATGATCAAGGCCATCAAAGTGAGACACAACAATGTGGTTCCCACAATGGCCTTGGGTGTTCAGCAATTGAAGAAAGGTATGGATCCAAAGATTGTTTATGAAGATCTTGTCGAGATTCACCAGTTCCTTGATCGTTTTTACATGTCAAGAATTGGGATCCGTATGCTTATCGGTCAGCATGTTGAGTTGCACAATCCCAATCCTCCACCCTTTGTGGTTGGTTATATACACACAAAAATGTCTCCTGTGGAGGTTGCGATGAATGCCAGTGAGGATGCTCGTTCTATATGTTGTCGTGAATATGGAAGTGCACCTGATGTTCAAATTTATGGAGATCCTGATTTTACTTTTCCGTATGTTCCAGCTCACTTACATCTTATGGTATTTGAGTTGGTTAAGAACTCGCTGCGTGCTGTCCAAGAACGTTTCATGGATTCTGATAAAGTTGCACCCCCCATTAGAATCATAGTTGCTGATGGGATAGAGGATGTTACAATAAAGGTCTCAGATGAGGGAGGTGGAATTCCAAGAAGTGGTTTACCTAAAATTTTTACATATCTGTATAGTACAGCCAAAAATCCATTGGATGAGCATTCAGATCTTGGAATAGGTGAGAATGTGACAATGGCTGGATATGGATATGGACTTCCTATTAGTCGCTTATATGCTCGATATTTTGGAGGTGATCTTCAAATGATATCTATGGAAGGATATGGGACTGATGCATATCTCCATTTGTCTCGTTTGGGAGATTCACAAGAACCTTTGCCTTGA 1212 0.4142 MVPINSALRGPNFHFSSSTISLRFKGSYLQNQIFMAAKKACESFSKSLIEEVHRWGCLKQTGVSLRYMMEFGSKPVNKNLLISAQFLHKELAIRIARRAIELENLPYGLSQKPAILKVRDWYLDSFRDLRAFPDIKNMNDEREFTEMIKAIKVRHNNVVPTMALGVQQLKKGMDPKIVYEDLVEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPFVVGYIHTKMSPVEVAMNASEDARSICCREYGSAPDVQIYGDPDFTFPYVPAHLHLMVFELVKNSLRAVQERFMDSDKVAPPIRIIVADGIEDVTIKVSDEGGGIPRSGLPKIFTYLYSTAKNPLDEHSDLGIGENVTMAGYGYGLPISRLYARYFGGDLQMISMEGYGTDAYLHLSRLGDSQEPLP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00585 403 CDD HATPase_PDK-like 227 393 - -
Viun9g00585 403 PRINTS Bacterial sensor protein C-terminal signature 356 374 IPR004358 GO:0016310|GO:0016772
Viun9g00585 403 PRINTS Bacterial sensor protein C-terminal signature 310 324 IPR004358 GO:0016310|GO:0016772
Viun9g00585 403 PRINTS Bacterial sensor protein C-terminal signature 380 393 IPR004358 GO:0016310|GO:0016772
Viun9g00585 403 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 268 393 IPR003594 -
Viun9g00585 403 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 230 392 IPR036890 -
Viun9g00585 403 Pfam Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 62 222 IPR018955 -
Viun9g00585 403 FunFam [Pyruvate dehydrogenase (Acetyl-transferring)] kinase mitochondrial 225 402 - -
Viun9g00585 403 PANTHER PYRUVATE DEHYDROGENASE KINASE 41 403 IPR039028 GO:0004672
Viun9g00585 403 Gene3D - 37 215 IPR036784 -
Viun9g00585 403 FunFam [Pyruvate dehydrogenase (Acetyl-transferring)] kinase, mitochondrial 40 217 - -
Viun9g00585 403 Gene3D - 225 402 IPR036890 -
Viun9g00585 403 SUPERFAMILY alpha-ketoacid dehydrogenase kinase, N-terminal domain 50 213 IPR036784 -
Viun9g00585 403 SMART HKATPase_4 265 396 IPR003594 -
Viun9g00585 403 ProSiteProfiles Histidine kinase domain profile. 270 396 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00585 Viun-Chr9 4304538 4308092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00585 K00898 - gmx:100814079 719.539