Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00557 ATGGTGCTCAGGAACACAGATCCCACTGCTCATGCAGAAGTCACTGCAATAAGAAAGGCTTGTGAAAATCTGAACAAGATAGAACTTTCTGACTGTGAAATTTATGCTTCTTGCGAACCTTGCCCAATGTGCTTTGGAGCAATCCACCTCTCACGAGTTAAGAGGTTGGTTTATGGAGCGAAAGCAGAGGCAGCAATTGCGGTTGGGTTTGATGACTTCATTTCAGATGCATTGAGAGGCACTGGATTCTATCAGAAAGCACAATTGGAGATTAAAAGAGTTGATGGAAAAGAGGGTAACATTGCTGAAGAAGTTTTTGAGAAAACAAAGGAAAAGTTTCGAATGTTTTGA 351 0.4131 MVLRNTDPTAHAEVTAIRKACENLNKIELSDCEIYASCEPCPMCFGAIHLSRVKRLVYGAKAEAAIAVGFDDFISDALRGTGFYQKAQLEIKRVDGKEGNIAEEVFEKTKEKFRMF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00557 116 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 2 63 - -
Viun9g00557 116 Pfam MafB19-like deaminase 5 109 IPR028883 GO:0002100|GO:0008251
Viun9g00557 116 SUPERFAMILY Cytidine deaminase-like 2 75 IPR016193 GO:0003824
Viun9g00557 116 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 11 48 IPR016192 GO:0008270|GO:0016787
Viun9g00557 116 FunFam tRNA-specific adenosine deaminase 1 115 - -
Viun9g00557 116 Gene3D Cytidine Deaminase, domain 2 1 115 - -
Viun9g00557 116 CDD nucleoside_deaminase 1 72 - -
Viun9g00557 116 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1 69 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00557 Viun-Chr9 4167616 4168943 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00557 - - gmx:100527067 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05537 3 61222006 61224953 Viun9g00557 9 4167616 4168943 PCT