Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00553 ATGGAATCAAAAACTGCTGCTTTGGATCAACCCCTTCATCTAATGGGCTTTGAAATCGAAGAACTATCACCGCAAAAAATCTCTGGCCGTCTCCCTGTCACCCACAAGTGCTGCCAGCCATTTAAGGTGCTTCATGGAGGGGTTTCAGCATTGATAGCAGAGTCTTTGGCAAGCATGGGAGCACACATGGCTTCTGGGTATAAAAGAGTGGCTGGAATTCAACTCAGCATAAACCATTTGAAACGAGCTGAGATTGGTGACTTGGTGCACGCAGAAGCTAAACCTTTAAACGTTGGCAAAACAATTCAGGTATGGGAGGTGATACTATGGAAGATTGATCCTTCAGACGCACAAAAAAGATCCTTGGTCTCATCTTCTAGAGTAACTCTAGTAACCAATATGCCTGTCCCAGTTCATGCAAAAGATGCTGCTGAACCGTTAAAGAAGTTTGCAAAACTGTAA 462 0.4394 MESKTAALDQPLHLMGFEIEELSPQKISGRLPVTHKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVAGIQLSINHLKRAEIGDLVHAEAKPLNVGKTIQVWEVILWKIDPSDAQKRSLVSSSRVTLVTNMPVPVHAKDAAEPLKKFAKL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00553 153 Gene3D Hotdog Thioesterase 1 133 - -
Viun9g00553 153 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 1 133 - -
Viun9g00553 153 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 3 152 - -
Viun9g00553 153 Pfam Thioesterase superfamily 42 114 IPR006683 -
Viun9g00553 153 NCBIfam hotdog fold thioesterase 13 108 IPR003736 -
Viun9g00553 153 CDD PaaI_thioesterase 14 129 - -
Viun9g00553 153 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 12 131 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00553 Viun-Chr9 4149795 4153488 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00553 K19222 - gmx:100527403 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00553 9 4149795 4153488 Viun9g00553 9 4149795 4153488 ECH