Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00550 ATGTTAGCTTCTTCTCTTTCCTTCCTTCATTCCTGCGGATTCCCTTCTTCTGCTTCTTCTTCTTCCTCTTCCTTATCCACAATATCACAACCAAAACCCAAATCTTTCGTGGTTGAAGCCAAAGTCAGGACCCGAAGGGAAGACAGAACTGCGCGCCACACTCGCATCAGAAAGAAGATTGAAGGGACACCCGAGAGGCCGAGGTTGTCGGTGTTCCGGTCCAACAAGCACCTCTCTGTGCAGGTGATTGATGACACCTCGATGCACACGCTTGCTTCGGCTTCCACAATGCAGAAAACCATTTCTGAAGAGTTTAATTACTCAGCTGGCCCCACACTTGAAGTAGCAAAAAAGATGGGTGAGATCATTGCAAAGTCCTGTTTGGAGAAGGGGATCACAAAGGTAGCCTTTGATCGAGGGGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGAAGCAGCTCGTGAACATGGCTTAGATTTCTAA 489 0.4826 MLASSLSFLHSCGFPSSASSSSSSLSTISQPKPKSFVVEAKVRTRREDRTARHTRIRKKIEGTPERPRLSVFRSNKHLSVQVIDDTSMHTLASASTMQKTISEEFNYSAGPTLEVAKKMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00550 162 Gene3D - 44 162 - -
Viun9g00550 162 MobiDBLite consensus disorder prediction 12 35 - -
Viun9g00550 162 Hamap 50S ribosomal protein L18 [rplR]. 44 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Viun9g00550 162 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 44 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Viun9g00550 162 NCBIfam 50S ribosomal protein L18 46 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Viun9g00550 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 39 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Viun9g00550 162 CDD Ribosomal_L18_L5e 56 160 - -
Viun9g00550 162 MobiDBLite consensus disorder prediction 12 33 - -
Viun9g00550 162 FunFam 50S ribosomal protein L18 43 162 - -
Viun9g00550 162 SUPERFAMILY Translational machinery components 45 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00550 K02881 - gmx:100778569 264.618