Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00524 ATGAGGACGTCGTCGTTCGGGAGATGCAGCAGCGCCGAGTTCGAACTGCCGGAGAGCTTCGGCACCTCGTCTCCGACGGTCGGGGGACGCGCCTACGGCGCAATGATGCCGGTGTTCCTCAACGACCTCCGGAGCAACCACCACAAGGAGCTCGTGGAGATCACGCTGGAGCTCGAAAACGACGCGGTCCTTCTCTGCAACGTGACGCCGGCGGCCGCGTATTCCGCTCCCAATGCTTCTCCATCGTCGAGCAGGGGAGGGGGTGACGACGGCGCCGGCGTGGCTCGGAGCCTCTCTATTACGTCGAGGATTCGGAGGAAGTTCCCGTGGCTGCGGTCGTTGTCGTCGGCGTCGGTGGAGAGTGTCGCCGCCGCCGAGGATCCGGTGACGACGGCGCGAAACGCGCGGAAAATGAGAGCGAAGCTTGAACGGACGAGGTCGAGTGCGCAGAGAGCTCTGAAAGGTCTGAGATTCATCAGCAAGTCCGGTGAAGCCAGCGAGGAGTTGTGGGGAAAGGTGCAAGAACGTTTCAGCTTGCTGGCCAAAGATGGCATGCTCGCTCGTGAAGACTTTGGTGAATGCATAGGGATGGAAGATTCGAAGGAATTTGCAGTGTGTATATTCGACGCATTGACTCGGAGGAAGGAAAGGAGAGTTAGTAGCATAAACAGAGAAGAGTTGCACGAGTTCTGGTTGCAAATTTCAGACCAGAGTTTTGATGCTCGCCTGCAGATTTTCTTTGACATGGCAGACAGTAACGAGGACGGAAGAATTACTAGAGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCCGCAAACAAGTTATCGAAGCTAAAGGAACAAGCTGAAGGATATGCTTCCTTAATAATGGAAGAATTAGATCCAGAAAACCTGGGTTATATCGAGCTGTGGCAGCTAGAAATGTTATTACTAGAAAAAGATAGATACATGAATTACAGCAGACAACTGAGCAGTGCAAGCGTAAATTGGAGTCAAAATATGACTGATACAAGGTCTGGAAATGATATACAAAGATTGCGCAGGACCCTCCAATGTATTGCATTAGAGTATTGGAGAAGGGGTTGGATTTTGTTATTGTGGTGGGTTACCATTGCTACCCTCTTTGGCTGGAAATTTTTCCAGTATAGAAACAGATCAACTTTTCAAGTCATGAGCTACTGCATACCCATAGCCAAGGGTGCTGCAGAGACACTCAAGTTCAACATGGCTCTCATCCTCTTACCAGTCTGTCGAAACACTCTTACATGGCTTCGTTCCACCGGAGCCAGGAAGTTTGTGCCCTTCGATGACAACATTAATTTCCACAAGATGATTGCATTCGCCATAGCTGTTGCAGTCGCCGTTCATGCGGGCAGTCATCTGGCGTGTGATTTCCCCCTTCTCGTGAACTCATCTCCGGAAAAATTTTCACTTATATCTTCAGATTTCAATAACAAAAGACCCACGTACAAATCACTTCTGACCGGAGTAGAAGGCGTAACCGGTATCTCCATGGTTATTCTCATGGCCATCTCTTTCACTCTAGCAACTCACCACTTCCGGAGAAACGCTGTGAGGCTTCCTTCACCCTTTAACAGATTGACAGGCTTCAACGCATTTTGGTACTCACACCACCTTTTTGCTCTCGTCTACGTTCTGCTACTCGTCCATGGAACATTCTTGTATTTGACCCATCGGTGGTACCACAAAACGACATGGATGTATATCTCTGTTCCTCTGCTGCTGTACATAGCAGAGCGTACTCTACGCACTCGAAGATCAGCACATTATACGGTGAAAATTCTGAAGGTATCGGGGCTACCAGGAAATGTCTTCAGCTTAATCATGTCTAAGCCTAATGGATTCAAGTACAAAAGCGGACAGTACATATTTTTACAATGTCCAAAAATCTCTCCCTTTGAGTGGCACCCATTTTCCATCACCTCAGCTCCAGGAGATGAGTACCTAAGTGTTCACATCCGAACAGTGGGAGACTGGACACAAGAACTTAAGCTTCTGCTGACAAAAGATGATGACAAATTGCCTTCGGTTAAACGTGGTGCGACGTTTGGTGAACTAATGCAACTGGATCAAAGAGGACAACCGAGGCTGCTTGTCGATGGCCCTTATGGAGCTCCAGCACAGGACTACCAGAGCTTTGATGTACTACTCCTCATAGGATTAGGAATTGGAGCAACTCCTTTCATTAGCATTCTCAGAGATCTTCTCAGTAACACCAAAACACTGGATGAACTCGGGGAACCATCAAACACAGAAACAAGTCAAGCAACCAGATCAGACGAGAGCTCCAATAGTTTTACATCGTCAAACTTAACGCCCGGAGGAAATAAGAGATCACGAAGGACTACAAATGCTTATTTCTACTGGGTTACTAGGGAGCCTGGATCTTTCGAATGGTTTAAAGGAGTAATGGACGAAGTTGCAGAAATGGACCACAAAGGGCAAATTGAGCTCCACAATTATCTTACAAGTGTCTATGAAGAGGGGGATGCGAGATCAACCTTAATCACCATGATCCAAGCACTGAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTCGAGTAAGAACACACTTTGCTAGGCCTAATTGGAAAGAGGTTTTCAACAAGATTGCCTCCAAACATCCGTTTTCTACAGTAGGGGTGTTCTATTGCGGGATGCCAGTATTGGCAAAGGAGCTAAAGAAGCTATCAGTTGAACTCAGCCACAAGACAACTACACGCTTCGAGTTTCACAAGGAGTACTTCTGA 2781 0.4782 MRTSSFGRCSSAEFELPESFGTSSPTVGGRAYGAMMPVFLNDLRSNHHKELVEITLELENDAVLLCNVTPAAAYSAPNASPSSSRGGGDDGAGVARSLSITSRIRRKFPWLRSLSSASVESVAAAEDPVTTARNARKMRAKLERTRSSAQRALKGLRFISKSGEASEELWGKVQERFSLLAKDGMLAREDFGECIGMEDSKEFAVCIFDALTRRKERRVSSINREELHEFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYASLIMEELDPENLGYIELWQLEMLLLEKDRYMNYSRQLSSASVNWSQNMTDTRSGNDIQRLRRTLQCIALEYWRRGWILLLWWVTIATLFGWKFFQYRNRSTFQVMSYCIPIAKGAAETLKFNMALILLPVCRNTLTWLRSTGARKFVPFDDNINFHKMIAFAIAVAVAVHAGSHLACDFPLLVNSSPEKFSLISSDFNNKRPTYKSLLTGVEGVTGISMVILMAISFTLATHHFRRNAVRLPSPFNRLTGFNAFWYSHHLFALVYVLLLVHGTFLYLTHRWYHKTTWMYISVPLLLYIAERTLRTRRSAHYTVKILKVSGLPGNVFSLIMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDEYLSVHIRTVGDWTQELKLLLTKDDDKLPSVKRGATFGELMQLDQRGQPRLLVDGPYGAPAQDYQSFDVLLLIGLGIGATPFISILRDLLSNTKTLDELGEPSNTETSQATRSDESSNSFTSSNLTPGGNKRSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFNKIASKHPFSTVGVFYCGMPVLAKELKKLSVELSHKTTTRFEFHKEYF 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00524 926 Gene3D - 712 926 IPR039261 -
Viun9g00524 926 CDD NOX_Duox_like_FAD_NADP 602 878 - -
Viun9g00524 926 Pfam FAD-binding domain 599 714 IPR013112 GO:0016491
Viun9g00524 926 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 595 717 IPR017927 GO:0016491
Viun9g00524 926 CDD EFh 221 268 IPR002048 GO:0005509
Viun9g00524 926 SUPERFAMILY EF-hand 158 322 IPR011992 -
Viun9g00524 926 SFLD NADPH oxidase subgroup (NOX) 134 926 - -
Viun9g00524 926 Gene3D Translation factors 584 683 - -
Viun9g00524 926 MobiDBLite consensus disorder prediction 750 786 - -
Viun9g00524 926 Pfam Ferric reductase like transmembrane component 401 556 IPR013130 -
Viun9g00524 926 Coils Coil 132 152 - -
Viun9g00524 926 PRINTS Cytochrome B-245 heavy chain signature 538 558 IPR000778 GO:0016020|GO:0016491
Viun9g00524 926 PRINTS Cytochrome B-245 heavy chain signature 446 464 IPR000778 GO:0016020|GO:0016491
Viun9g00524 926 PRINTS Cytochrome B-245 heavy chain signature 703 716 IPR000778 GO:0016020|GO:0016491
Viun9g00524 926 PRINTS Cytochrome B-245 heavy chain signature 726 743 IPR000778 GO:0016020|GO:0016491
Viun9g00524 926 Pfam Respiratory burst NADPH oxidase 141 241 IPR013623 GO:0004601|GO:0050664
Viun9g00524 926 PANTHER NADPH OXIDASE 203 926 - -
Viun9g00524 926 FunFam Respiratory burst oxidase homolog A 142 259 - -
Viun9g00524 926 FunFam Respiratory burst oxidase protein E 712 926 - -
Viun9g00524 926 Gene3D - 142 259 - -
Viun9g00524 926 SUPERFAMILY Riboflavin synthase domain-like 598 714 IPR017938 -
Viun9g00524 926 ProSiteProfiles EF-hand calcium-binding domain profile. 238 273 IPR002048 GO:0005509
Viun9g00524 926 ProSitePatterns EF-hand calcium-binding domain. 251 263 IPR018247 -
Viun9g00524 926 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 720 926 IPR039261 -
Viun9g00524 926 FunFam Respiratory burst oxidase homolog A 586 678 - -
Viun9g00524 926 Pfam Ferric reductase NAD binding domain 721 908 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00524 Viun-Chr9 3828361 3835176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00524 23 926 Miscellaneous Gene Families AT1G19230 62.156 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00524 K13447 - gmx:100805697 1653.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00524 9 3828361 3835176 Viun9g00524 9 3828361 3835176 ECH