Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00483 ATGGTGACCATGGCCACCACTGCCAATAGAAAAATCGAAACATACGAAGAGTTCGCGAAAGTTCACGCGCTGCTACTTGCGGCGTCGGGGTTGCCGGAGTGTCTGCACCAGCGTCTCTTCGAGAAGCTCTACGGAGAGTCATTTGATGGCGGCAAGCACTTCAAGATCGAGCCATGCGAGGGCGGCTGTCAGCGGCGCCTTGTTCTTACGTCGGCGTCGATGGAAAAGAACTCCGACGTCTTCCTCGTTGATCATGCATGGACTTTCAGACTCTCCGACGCATTCAAGCAGCTGCGTGAGGTTCCAGGATTGACTGAGAGGATGGGTTCTCTAATGTGTGTGGATGCTGATGTGAGTTCAGATGATGGTGAAGATGAAAGGAACGATGAGCTTGGTGTTGAGGAAACTATAGAGATGGAAGTTGATGCGGCAAAGGAGAACGGAGATGGGACGTTACGGTGGTTGGAGCTTGAAGGGCTCAACATTGATGATGCTATGCTTGTGTCTCTAGCATTGCCAACTAGGTTTCCGGATTTAGTGGCACTTAGCCTACTTGAAAACAAGCTCAATAGCGCCGAAGTGGTTGTTCAGGAAGTTATCAAACTTAAGCATCTCAAAGGATTATGGCTCAGAAGTAACCCAGTTCATAACAATAGTGATGGTAAGCTTGCAGGGGCGATTCTTAAGGAGTTGCCTGAACTTGAAATTTATAATTCAAGTTTCACAAGCAATTTTGGGGAGTGGGCGTTGGGCTTTTGTGCAGGGATATATGGAAAGGATAACCCTGTAAATGCTGATCAAGCTCACACTTCACTTCACACTGTGTCTTCTCTTGACCTTTCAAATAGGAACATTCACAATTTAAAGAATAAGGCATTTACACCCATTTGTTTGCCATCTCTTACGTACTTGAACATTCAAGGAAATCCATTGGAGCAAAACTCAGTTGGTGACTTGTTAGATCTGCTGCAGAGATTCCCTTGCTTGCGGTCGTTGGAGGTTGATATTCCAGGTCCACTTGGACGAAGGGCCATTGATATTCTTGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCGATGCATCCAAAATATTGCAACCAGGAAAGCATGTTAATGATTCAATGCTTCTTCCTCGTATTCCTGAATGGACTCCTGATGAGCCGCTTGCTGATCGTATTATAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGACGAAACATCAGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGACATAGTGATGAGCCAAATTTCAGAGTGGCACCATTTTTGTTCATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACACAGAATGTTCAGAAAGGTGATGAGTGCACACGCGATTTTCTTCTTGGTATTGGGGAAGATAAACAACGTTCTGCCAGGCTTACTGCCTGGTTCCACACTCCAGAAAACTACTTTATCCATGCATATGAGAAGCACCATCAGAAATTGTTGTCCACAAGTCTAATACCTCCCACCTTTCAGTATTCTGCGACTCAAAGTATTCATCAACATGGTGGGCGTCCATTGCTTGTTTACACAGATATACCTCACGTAGAGGAATACTTGACACATCCCGAGTTTGCAATCACAAATGAACCAAAAGATGCAGATATAATATGGACAAGTATGCAGGTAGATGAGGAGATGAAGAAAGCTACTGGAATAACGGATCAGCAATACATTAATCAATTTCCTTTTGAAGCATGTCTTGTTATGAAGCATCATTTAGCAGAGACAATTCAAAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACATATAATCTCGAAACGCACCTATCTCAACTTATTGGTGACTATTGTGTTCGCAAAAGGGAAGGGCTAGACAATCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACCATTGATACTACTGTAACTGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAGATTTGTCAGAAGTATATTGAACAGCCTGCATTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCATCCTCTGGAGATATTCCTTTCAGATTGTTTCTGGGTTAGGATTGCCAACAATCAATATTCTTTGGCCAGAAGTAGTTTGTTTGAGTATGAAACTCATTTCACTGTAATGAATTATCGCGGAACCATAAATCATAAGAATGCCAATGAATTTGTAAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATGATTCGTTCAGTATTTGAGGCAGCTGCTGTTGCTCATCCTGAGATGCACAATCCAACATCAAGGGCAATGTATGGTGTTGATGTCATGTTGGACGGCTCTTTCCAACCCAAGTTACTAGAGGTAACTTATTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTGGTTGGAGAGGGAGGCATTGCAAAAGGTTGTGATTTCTTCAATAATGTGTTCAAGTGTCTCTTTTTGAATGGAACTTCACAAGTTAGTCAATTGTAA 2607 0.4288 MVTMATTANRKIETYEEFAKVHALLLAASGLPECLHQRLFEKLYGESFDGGKHFKIEPCEGGCQRRLVLTSASMEKNSDVFLVDHAWTFRLSDAFKQLREVPGLTERMGSLMCVDADVSSDDGEDERNDELGVEETIEMEVDAAKENGDGTLRWLELEGLNIDDAMLVSLALPTRFPDLVALSLLENKLNSAEVVVQEVIKLKHLKGLWLRSNPVHNNSDGKLAGAILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPVNADQAHTSLHTVSSLDLSNRNIHNLKNKAFTPICLPSLTYLNIQGNPLEQNSVGDLLDLLQRFPCLRSLEVDIPGPLGRRAIDILESLPNISELNGIDASKILQPGKHVNDSMLLPRIPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNVQKGDECTRDFLLGIGEDKQRSARLTAWFHTPENYFIHAYEKHHQKLLSTSLIPPTFQYSATQSIHQHGGRPLLVYTDIPHVEEYLTHPEFAITNEPKDADIIWTSMQVDEEMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCVRKREGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLARSSLFEYETHFTVMNYRGTINHKNANEFVREFEEEHQVKWLDIHTRVRKMIRSVFEAAAVAHPEMHNPTSRAMYGVDVMLDGSFQPKLLEVTYCPDCTRACKYDMDIVVGEGGIAKGCDFFNNVFKCLFLNGTSQVSQL 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00483 868 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 8 867 IPR027749 -
Viun9g00483 868 Gene3D - 662 842 - -
Viun9g00483 868 ProSiteProfiles TTL domain profile. 532 868 IPR004344 GO:0036211
Viun9g00483 868 SUPERFAMILY RNI-like 152 358 - -
Viun9g00483 868 Gene3D Ribonuclease Inhibitor 257 364 IPR032675 -
Viun9g00483 868 Gene3D Ribonuclease Inhibitor 122 244 IPR032675 -
Viun9g00483 868 Pfam Tubulin-tyrosine ligase family 586 836 IPR004344 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00483 K16609 - gmx:100809212 1542.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00483 9 3404528 3410178 Viun9g00483 9 3404528 3410178 ECH