Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00452 ATGCCCCACCGTCGCTCCTGGCACTCATCGCCACCCTTACTCAGCCCTCCACTCATAATCATTCTCTTCCCCATCGTCATTCTCACCATCCTCTTCCTCGCTCTGCCGCCGCTCCTCTCCGCCGCCACGCGCCTCATACGCCCGGCCTCCGTCAAGACCAGCTGGGACTCCCTCAACATCCTCCTCGTCGTTTTCGCAATCCTGTGCGGCGTCTTTGCCAGACGAAACGACGACGAACACACCCCAAGAAATAACCACCACGACGCCGTTCCGGATCGAAACGCTGCGTTTCGACAGGTCTCTTCCGTAGGACAACCTCAGTGGCTTGGGTTCACAGGGGAAAGAAAAGAGTATATTAATGATACTCCTCTGAACCGGTTTCAGTCACCTGCAACCGGTGATACGCGGTTGAGGATGAGAAGAAACAGCAGCTCTTATCCAGATCTGCGCCAGTGGGAAACCGGCGATGACCGGTACAAGTTCCGCTTCTTTGATGATTTTGAAATCGACAAGCAGTTCCGCTCTCCGGCCAGGGACCATTTTCCCGCCGTCGACCACCACAAACGGTTTCCGGAATCACCACCATCACTGTCACCACAGCCACAGCATCAGCATCAACACCACCAACAACAAGAAGATGGAGAAAAGGAAATTCCGGTTGATACCTTCGAAACTCGTCCTCCATCACCGCCGGTGAAATCTACTACGCCAACTCCTCCACCACCACCGCCGCCTCCTCCTCCTCCGCAGCCGGAATCGGCACGTCGCAATGCACGACGGTCGCATCGGAAAACAGAGAGAGTCAGTGAGATAACCGTCGAGCTCGACGAGCGCGAGTTCACGACGATCCGCTCTCCACCTCCGGCTCCTCCGACCCCGCCGCCGCCGTCGGCGAAGGAGCGATCGGAGCGTAAGAGCGAGCGAAAGAAGAGCAATGTGAAGAGAGAGATAGCGATGGTTTGGGCTTCAGTTCTCTCCAACCAGCGAAAGAAAAAGAAGAAGCAAAGAGCAAAAGATAACCACGATCAACATTACGAAGAAAATGCCGACGAATTAACGAACACCACGACAGTGCCACCACCAACGCCGCCACCTCCACCACCTCCTCCGCCACCAACTTCAATGTTCCACAGTCTATTCCGAAAAGGACTAGGCAAGAGCAAGAAAATCCACTCAGTGTCACCGCCACCACCCCCGCCACCTCCTCCGCCGTCGAAGCGGTGGTCAAAGCGCAAGAGCCACATCCCTCCCCCGTCTCCTCCATCTCCGCCGTCTCCTCCACGCCGTCGAAACACGGGGCGACCACCGCTGCCGAGCAGAAGCGCCAATTTCCACGACGAGATTCACGAGTCAGTTAACGTCGGGAACCAGTCGCCGCTGATTCCGGTTCCGCCACCGCCTCCGCCGTTCAAGGTGAAGGCGATGAAGTTCGTTGTCCGCGGAGATTTCGTCAGGATACGCAGCAACCATAGCTCGCGGTGTAGCTCTCCAGAAAGGGAAGAAATTATAATGAATGTATCGGAAAGTACAGTGAGCGAGAGCGTTAGGGATGGTAACGGCGTTTTCTGTCCCAGCCCCGATGTGAACCTTAAGGCTGAATCGTTCATCGCTAAGCGCAGGGGAGAGTGGAAGCTCGAAAAACTCAACTCCTTGAAGGAGAAAAGCAATGTCTCGTTGCCTCGTAGGTTGTAG 1692 0.5579 MPHRRSWHSSPPLLSPPLIIILFPIVILTILFLALPPLLSAATRLIRPASVKTSWDSLNILLVVFAILCGVFARRNDDEHTPRNNHHDAVPDRNAAFRQVSSVGQPQWLGFTGERKEYINDTPLNRFQSPATGDTRLRMRRNSSSYPDLRQWETGDDRYKFRFFDDFEIDKQFRSPARDHFPAVDHHKRFPESPPSLSPQPQHQHQHHQQQEDGEKEIPVDTFETRPPSPPVKSTTPTPPPPPPPPPPPQPESARRNARRSHRKTERVSEITVELDEREFTTIRSPPPAPPTPPPPSAKERSERKSERKKSNVKREIAMVWASVLSNQRKKKKKQRAKDNHDQHYEENADELTNTTTVPPPTPPPPPPPPPPTSMFHSLFRKGLGKSKKIHSVSPPPPPPPPPPSKRWSKRKSHIPPPSPPSPPSPPRRRNTGRPPLPSRSANFHDEIHESVNVGNQSPLIPVPPPPPPFKVKAMKFVVRGDFVRIRSNHSSRCSSPEREEIIMNVSESTVSESVRDGNGVFCPSPDVNLKAESFIAKRRGEWKLEKLNSLKEKSNVSLPRRL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00452 563 MobiDBLite consensus disorder prediction 206 222 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 184 468 - -
Viun9g00452 563 PRINTS Proline rich extensin signature 228 240 - -
Viun9g00452 563 PRINTS Proline rich extensin signature 283 300 - -
Viun9g00452 563 PRINTS Proline rich extensin signature 193 205 - -
Viun9g00452 563 PRINTS Proline rich extensin signature 347 372 - -
Viun9g00452 563 PRINTS Proline rich extensin signature 240 261 - -
Viun9g00452 563 Coils Coil 327 347 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 392 406 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 298 315 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 263 281 - -
Viun9g00452 563 PANTHER COTTON FIBER (DUF761) 280 554 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 121 151 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 224 253 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 122 150 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 414 433 - -
Viun9g00452 563 MobiDBLite consensus disorder prediction 357 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00452 Viun-Chr9 3170448 3172139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00452 - - pvu:PHAVU_009G229500g 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00452 9 3170448 3172139 Viun9g00452 9 3170448 3172139 ECH