Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00448 ATGGGGGAAGAGGCGAGTGTAACCAATTTGCGTAATGAAAACGGTGGAAACGAAGATCAGAACATGGAATTCGACATTTATCCTTTGAGTAGTTACTATTTTGGATCCAAAGACGCAATTCCCTTCAAAGACCTCTCTCTACATAATCACCTTCTCAGGATTCAATCCAACTATGCTGCTCGTGGATTACGAACTTCTGTGGAGGCTGTCTTACTGGTTGAACTGTTCAAACATCCACACTTGTTGCTTTTGCAAGTAAGAAATTCCATCTATAAACTTCCCGGTGGTAGATTAAGGCCAGACGAATCAGATACTGATGGATTGAAGCGTAAGCTGACAAGGAAGCTTTCTGTTGATGAAGATGGAGATGGTTCAGAATGGGAGGTTGGTGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACATTATTGTACCCTTTCTTGCCACCAAATGTAAAACAACCAAAGACATATGGGCAAATAATATCAGGGGTTCCACAGCTTCTGTCAAAATTCTCTTTCAACATGTTGGAATCTTGA 543 0.4125 MGEEASVTNLRNENGGNEDQNMEFDIYPLSSYYFGSKDAIPFKDLSLHNHLLRIQSNYAARGLRTSVEAVLLVELFKHPHLLLLQVRNSIYKLPGGRLRPDESDTDGLKRKLTRKLSVDEDGDGSEWEVGECLGMWWRPDFETLLYPFLPPNVKQPKTYGQIISGVPQLLSKFSFNMLES 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00448 180 MobiDBLite consensus disorder prediction 1 21 - -
Viun9g00448 180 SUPERFAMILY Nudix 69 136 IPR015797 -
Viun9g00448 180 PIRSF CPSF-25 2 158 IPR016706 GO:0003729|GO:0005849|GO:0006378
Viun9g00448 180 PIRSF CPSF-25 157 180 IPR016706 GO:0003729|GO:0005849|GO:0006378
Viun9g00448 180 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 19 157 IPR016706 GO:0003729|GO:0005849|GO:0006378
Viun9g00448 180 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 22 158 - -
Viun9g00448 180 Pfam Nucleotide hydrolase 23 158 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00448 Viun-Chr9 3154233 3156237 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00448 K14397 - gmx:100791216 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00448 9 3154233 3156237 Viun9g00448 9 3154233 3156237 ECH