Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00423 ATGGCGATCTCCGATGCGCCTGAAAGCGTAGGCACCGCCACCGGTCAAAGCGACTCAGATCTCAGACTGCTTTCTCTGCGGCGCAGGTCCAGCGCCACCTCCCAGGGCGGCTTCGACGCCGAAGACGCCGCCAGAGGTTCTGGCTCCGAGGAGTCCTTGAACAACAAAAACGTCGAGGAGAATAAAGACTGCAAGGCGAATCATGCAGCCTCTGATGATAATATCGTCGACAATGACGCTCGGAAAGAGCACGGAGAACAAGTCATCGATGTCAAATACGCTTACCGTCCCTCCGTTCCAGCTCACCGCAGAATCAAGGAGAGCCCGCTCAGCTCCGATAACATTTTCAGACAGAGTCACGCAGGACTGTTCAATCTCTGTATAGTAGTTCTTGTTGCGGTGAACAGCAGACTTATCATTGAGAACTTAATGAAGTATGGTTGGTTAATTAAGTATGGGTTTTGGTTTAGTTCAAAATCATTGAGAGATTGGCCCCTCTTCATGTGCTGTCTTAGTCTTAACATATTTCCACTTGCTGCCTTTATAGTGGAAAGGTTGGCACAGCAAAAGTGTATTTCTGAACGGGTTGTTGTTTTACTTCATCTAGTTATCTCAACGGCTGAGTTATCCTACCCAGTTTTAGTAATACTCAGGTGTGATTCGGCTTTTGTATCCGGTGTCACGTTGATGCTATTTACTTGCATTGTGTGGTTAAAATTGGTGTCATATGCCCATACAAACTATGATATGAGAGCACTTGCTGTTTCAAATGAAAAGGGAGAAACATTACCCAATACTTTGATTATGGAGCATCCATATACCGTGACGATCGGGAGTTTGGCATACTTCATGGTTGCACCTACATTGTGCTATCAGACAAGCTATCCTCGCACCCCTTCTGTTCGAAAGGGTTGGGTGTTTCGTCAACTTGTCAAGCTGATAATATTTACAGGAGTAATGGGATTTATAATAGAGCAATATATGAATCCAATTGTACAAAATTCACATCATCCTTTGAAGGGAAACCTTCTATATGCCATTGAAAGAATTCTGAAGCTTTCTGTTCCCAATGTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTTAAATATACTTGCAGAGCTTCTCCGATTTGGTGATCGTGAGTTCTATAAAGATTGGTGGAATGCAAGAACTGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTGCACAAATGGATGGTTCGCCACATATATTTTCCGTGCATAAGGAATGGTATACCCAAGGGTGGTGCTTCATTAATTGCCTTCCTGGTTTCTGCTGTTTTTCATGAGTTATGCATTGCCGTTCCTTGCCACGTGTTCAAGTTGTGGGCATTTATAGGAATTATGTTTCAGGTTCCATTGGTCTGGATCACTAATTACCTGCAAAATAAATACAGGAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTTTGTATTCTTGGTCAACCTATGAGCGTACTATTATACTACCATGACTTGATGAATAGAAACGGAGAAATTGACTAA 1551 0.4281 MAISDAPESVGTATGQSDSDLRLLSLRRRSSATSQGGFDAEDAARGSGSEESLNNKNVEENKDCKANHAASDDNIVDNDARKEHGEQVIDVKYAYRPSVPAHRRIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKYGFWFSSKSLRDWPLFMCCLSLNIFPLAAFIVERLAQQKCISERVVVLLHLVISTAELSYPVLVILRCDSAFVSGVTLMLFTCIVWLKLVSYAHTNYDMRALAVSNEKGETLPNTLIMEHPYTVTIGSLAYFMVAPTLCYQTSYPRTPSVRKGWVFRQLVKLIIFTGVMGFIIEQYMNPIVQNSHHPLKGNLLYAIERILKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNARTVEEYWRMWNMPVHKWMVRHIYFPCIRNGIPKGGASLIAFLVSAVFHELCIAVPCHVFKLWAFIGIMFQVPLVWITNYLQNKYRNSMVGNMIFWFIFCILGQPMSVLLYYHDLMNRNGEID 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00423 516 PANTHER STEROL O-ACYLTRANSFERASE 54 512 IPR014371 GO:0008374
Viun9g00423 516 PIRSF Oat_dag 10 516 IPR027251 GO:0004144|GO:0019432
Viun9g00423 516 MobiDBLite consensus disorder prediction 1 79 - -
Viun9g00423 516 MobiDBLite consensus disorder prediction 9 37 - -
Viun9g00423 516 Pfam MBOAT, membrane-bound O-acyltransferase family 228 499 IPR004299 -
Viun9g00423 516 PIRSF Oat_ACAT_DAG_ARE 11 515 IPR014371 GO:0008374
Viun9g00423 516 MobiDBLite consensus disorder prediction 55 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00423 Viun-Chr9 3043020 3055422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00423 90 516 Lipid Metabolism Gene Families AT2G19450 76.112 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00423 K11155 - gmx:547982 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00423 9 3043020 3055422 Viun9g00423 9 3043020 3055422 ECH
Viun3g05383 3 59978577 59987095 Viun9g00423 9 3043020 3055422 PCT