Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00344 ATGGATTCGGACACTAATGCACCAAAATCCAAAACTCCCAAAAAGGAGAAGAACAAGAAGAACAAGAAGCAAAAAGATGTTCCCCCTGAACCTGATCGAATTGAGGTTGCGGTGGAGGTTGTCCATGAGCACCCCAATAAAACAGCTCCTGTTGTCGGTTATTTTCCTTCGGGTTTTGATCCGGTTAAGAATTATGCAAGTGGTTCCGGTCCCTCTGAATTTCAACTTTACAGGCACAGGAACATGTCGAAGAGGATGCAGCTTGTTGTTCGCCCTCCTGGGTCTTCGGTGGAATTTGTTGGATCTAGTTTTTCTGGCGAGGCTGCGGCTGGACACCGGGCCATGTTCGCTCTTGGACTCCTTGATAAGGAAGCTGGGACCCTGAAGATTGTTCCCATTGCTGGTAATAAGATATTCAGATTGGAGCCAAAGATTAAAGGTATGGAAGCTGCTGACAATGAGCCTGCGAACTCAACATTGGAAGAGATGACTCCGCAGCAGAAGATTGCAGAGACGACTTCTATATGGGGAACAAAGAGGGATATAGAGAAGGCTAAAAAGAAGCTAGCTCTCAAGCAAGATGAAGATCCTAATTCTCAAAGGAATCTGGATGTGAAACTGAAAAATGTTTCTGTAAACAAAAGCGCTCTTGAAAGTACAGAATCTCATGTTTCTCGCAACATACCACCATATGATACTTCTGCAACTACACCTCAGGAGGCATATGTATTGGACAAAATCATCCTTACTGGAGAATGGGATTATCTTCAAGACATCTATAAAAATTTGCATCAGGAAGAAAAGACGGACTTCAGTTCTTATCCAACATTTGTTCGCAACAGGGTAGAGAGATTAAGAAAAATTAAGGATGAGTCAGAACAGAGGAAGCTTTCCTGCATACTCTCATACATCAATCATCTGATAAAGTTCAAAGATCAGCATTCCTTTGATGTTTTCTCTGCAAAGAGCCATAAAATCCCCAACATCCTGCGACATAAATTTACAAATATGTTTGCTGTTTCTGAATTAAGAAGGCTGCCCCCTGAAAAAATTTCTCTTCTCGTAAGTTATGTGCTGGTGCTTACACTTTTCGCTGATGACTTCCTAACTGACTGCACCGATATAGCAAAGGATCTGAGCATGAATGTTATGGCGGTGAGACAAGTCTATGAGCAACTGGGTTGCAAATTTACCCGCCAGAAAAGCGCTTTTAACGGTTTGCGTGCTACGCTTCCTGTCCCTCTTAAATTCCCTGAGTTAACGCAAAGAAAGAGGAAGAGGTAG 1284 0.4276 MDSDTNAPKSKTPKKEKNKKNKKQKDVPPEPDRIEVAVEVVHEHPNKTAPVVGYFPSGFDPVKNYASGSGPSEFQLYRHRNMSKRMQLVVRPPGSSVEFVGSSFSGEAAAGHRAMFALGLLDKEAGTLKIVPIAGNKIFRLEPKIKGMEAADNEPANSTLEEMTPQQKIAETTSIWGTKRDIEKAKKKLALKQDEDPNSQRNLDVKLKNVSVNKSALESTESHVSRNIPPYDTSATTPQEAYVLDKIILTGEWDYLQDIYKNLHQEEKTDFSSYPTFVRNRVERLRKIKDESEQRKLSCILSYINHLIKFKDQHSFDVFSAKSHKIPNILRHKFTNMFAVSELRRLPPEKISLLVSYVLVLTLFADDFLTDCTDIAKDLSMNVMAVRQVYEQLGCKFTRQKSAFNGLRATLPVPLKFPELTQRKRKR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00344 427 MobiDBLite consensus disorder prediction 1 33 - -
Viun9g00344 427 Pfam A49-like RNA polymerase I associated factor 73 418 IPR009668 GO:0003677|GO:0006351
Viun9g00344 427 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 37 427 IPR009668 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00344 K03005 - gmx:100812427 636.721