Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00313 ATGTTGTTGGGTGGTGCACTTTCAACTTCAATATCTCAAAGCCTCAATGCAACAAGAACAATTGCAATGTTCTATCCAACTCACCGATTATTGTCTCTTAAGAACCCAGTGGCAAATACCAGAGGATTTTCGTCAAAAGACACTGTTTTTATCAGGGGTCATCAAATCAATATAAAGCAATTTTTTGGGGTTATCTCGGATCGTGCTCGACTAAGCAAAGCAGGATTTGTTGTTTCCCCAATCTGTGCACTGCCACTGACAGAAGATAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTACAAGGGGCATGTGGATCATGTCCTAGCTCAACCATGACATTGAAAATGGGAATAGAAACTCGCCTCAGAGACAAGATACCTGAAATCATGGAAGTGGAACAGATAATGGACACTGAAACTGGTCTCCAGTTAACAGAAGAAAATGTAGAAAAAGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTGAGATGAATGATTATGTTGTGAAAGTTCGGCTAAGTGGACCTGCAGCTGGGGTTTCCACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGACAAGATACCTTCTATTGCAGCTGTGCAACTAATAGACTAA 714 0.4216 MLLGGALSTSISQSLNATRTIAMFYPTHRLLSLKNPVANTRGFSSKDTVFIRGHQINIKQFFGVISDRARLSKAGFVVSPICALPLTEDNVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQIMDTETGLQLTEENVEKVLSEIRPYLVGTGGGILELVEMNDYVVKVRLSGPAAGVSTVRVALTQKLRDKIPSIAAVQLID 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00313 237 Gene3D - 166 237 IPR034904 -
Viun9g00313 237 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 88 163 IPR034904 -
Viun9g00313 237 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 86 235 - -
Viun9g00313 237 Gene3D - 82 165 IPR034904 -
Viun9g00313 237 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 166 236 IPR034904 -
Viun9g00313 237 FunFam NifU-like protein 3, chloroplastic 166 236 - -
Viun9g00313 237 FunFam NifU-like protein 3, chloroplastic 83 165 - -
Viun9g00313 237 Pfam NifU-like domain 91 156 IPR001075 GO:0005506|GO:0016226|GO:0051536
Viun9g00313 237 Pfam NifU-like domain 172 234 IPR001075 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00313 Viun-Chr9 2090312 2091991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00313 - - gmx:100806364 399.053