Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00219 ATGGCATCGTCCGAGGTTGAGATTGCTTCTTCCTCGCCCTTCGGTTCCGTTCTGAGGGACCGCAACCACCGCGAAGAATGCAGGGAAAGCAACGCAAAGGGCACGCATAACCATCATGCTAAGTTACAGAGAAACAACAAGAACTTTGTCACGGACATTAACACGTGTCGGGGGGTGTCTTCTGATTCCGCAACAAACGAAAACAACAGCGGCTGCTGCAGCAGCAAGAACAAGGGCGTTAACCAGCGTAAGGCTCCGAAAAACACCCGCTTGGAGAGGCTTCGTTTCACACGAGCCAGCTCCTTCAACAACAACAACGGCATCATCAACAACAAAAAGGAGACATCTTTGTCCTTGTTGATCAGCCCAAGACACTCGCAGCTTCTCGATCGATGGGCAACGAGACAGGCTCGGGAGATGGTGTCGAATATGGAGAATGGGGCTGAACTTCTCTCAATGGATGACGTTGACATTTTCCCAAGGACACCCAGTTCCACATCTGAGGAAGAATCAAGCTCCTCAGAGATTCCCAACATGGCTGCTTCTTCTCTTGTTCAGATATGGGAGAAGAGGCTAAACCAATGTGTTGTCTCCAAAACGAACGCATCGTTTGAGAAGATCGGTTCATCCTCTTCTCCCACGAATGAGCATGCTAATGCTTCATTGCCCGAGGAAGAATGCTTTGATGGACCCTCAGGGAATGAAGAAAGTTCCTTTCACTCATTTCCTGAGTGGGAATCGAGTGACCATTCCGTTTCGCCTCAAGCCAGGTCTGAGAGTGGTGTCAGTGTTGCTAGCATCATAAAGAAACTCACTTCCACCAGCCAGAACCAGAGTCCAACACCTTCCTTTATTGATGAGAATGAACAAGAAGGGTATTTTAGTAGTAGTATGACAAGTGTGACAGGTTCTCCTTGTAGAGAGCGTGAATGTGGTCAACAACAACCACCTTCAGAGCTTAAATTTGCGTGTCCCCTGCGAATTAGAGGGCGTCAAGCTTTCAATGATTTGCTTATGCAGATGGAGAATGACAGACACAGGGAGCTCAACAACTTGTCAGAGCGTGGAGCGGTGTCTAAGTTCGCACAAAAAGGTCGCATTCAGGCATTGCTTCGGATTAAATTATTGCAACGTGATCTGGTGGCTAATGATCGCTCCCGGCAGAATTCAACATCATGCGAACTAAACAGACAATCACAAGGGTCTGCAATTATGCAATTAAGGGAAAGATTTAGCAGTGGGGTTGAACCTAGAACTCCGGTCCATGCAGAAGTAGCTACCCCAAGAAGTCCTAGAAGAAAGGCAGTTAACAAAACCATTCAATTGGATCATAATACTGAAGAAGCTCCTCCAAGTTCAGATGTCATGATCCAAGAAACAAATCCACGTTCAGATGCCAAGACTCAACAAAAAAACTCAAAAGAAACTAGTGAGGCAACGACATCCATGACTGATTCAGGTCTAAATGAGATGACAGACAGAGCAGAAGCTAGTAGCGAACAGAATGATATTACTAAAAGTAGTAATGATGAGACAGTAAATGAGGAAGATATTAGTAACCAGCAGTATGCTGAATCCAATGCTGAATCCGGTTACCAGGAGACACTAGAAGTGGCAAGTAATCAGAACTATGCTGAAAGCAGTTATGGTGATGAGATGGAAGGAGAGGAAACTGACCAGAATTGTGACTATGAAAGTAATTATAACTGGATCAGTGAAATTTCTAGGCCTAGGAGCTATTGGGAAGAGCGCAGGCAAGCCTGGTATAGAGAGATGCTTGAAACTGGTTCTCAGAATGAGGATATAAGGAGGCTTCTTGAAAGAAGAACAGTGTCAAGTTTCCTTTCTAGTGACTTCCGGGATAGAATGGATAGATTGATGGAATCTCATAGGGGAACACAAGCACATTTAGTGAATAGCCAGGACTATGAGGAAAACAGCCAAGAATTGATGGCATTTTTGCAGGAACGCTTGCATTCTGCAAGAGCTTCTCAAGAAGATGGAAGAGATGGAATTGAGGAAGAAGAGGATGAGGATAATGCAGAGGAGCACGAGCACGAGAGCTTGATAAGTGATCCATATCATGAAGCTGGTGATTATTCTAATCGTTCCTCATCATGCAGTTACAGGGACAATGAAGGCGGTGACGATTTTGATAGAGTTGTTTCTCCATCCGGACAACCTTATCAATCTCAATCTTTCTATCCAGAGAGTCGGCAATCTGCATCTCCATCCACCAATCATCATTCAATGGAAATGGAACTGATATATGATTTGAGAGGGCACATGGAGCAACTCTATCAGGAGATGTCAGAGCTGAAGAAAATAATAAAGGGCTGCATGAATATGCAGATGGAATTACAACAAACCATGAAAGTAGAGGTTCACTCAGTTAAAATACAAGAAAAAAAGTCCCGTAACAGGACTCAAAAAAAGAAAGGCAACTGCTGCATTTGCTATGAGGTCAAAGTTGACTCTGTTTTGTACAGGTGTGGACACATGTGTGCGTGTCTGAAGTGTGCCATCGAGTTGCAATGTAACAGTGGAAAATGTCCCATATGTCGGGCTAAAATAGTGGATGTTGTTCGAGTATATATTGACGGTTAG 2607 0.4446 MASSEVEIASSSPFGSVLRDRNHREECRESNAKGTHNHHAKLQRNNKNFVTDINTCRGVSSDSATNENNSGCCSSKNKGVNQRKAPKNTRLERLRFTRASSFNNNNGIINNKKETSLSLLISPRHSQLLDRWATRQAREMVSNMENGAELLSMDDVDIFPRTPSSTSEEESSSSEIPNMAASSLVQIWEKRLNQCVVSKTNASFEKIGSSSSPTNEHANASLPEEECFDGPSGNEESSFHSFPEWESSDHSVSPQARSESGVSVASIIKKLTSTSQNQSPTPSFIDENEQEGYFSSSMTSVTGSPCRERECGQQQPPSELKFACPLRIRGRQAFNDLLMQMENDRHRELNNLSERGAVSKFAQKGRIQALLRIKLLQRDLVANDRSRQNSTSCELNRQSQGSAIMQLRERFSSGVEPRTPVHAEVATPRSPRRKAVNKTIQLDHNTEEAPPSSDVMIQETNPRSDAKTQQKNSKETSEATTSMTDSGLNEMTDRAEASSEQNDITKSSNDETVNEEDISNQQYAESNAESGYQETLEVASNQNYAESSYGDEMEGEETDQNCDYESNYNWISEISRPRSYWEERRQAWYREMLETGSQNEDIRRLLERRTVSSFLSSDFRDRMDRLMESHRGTQAHLVNSQDYEENSQELMAFLQERLHSARASQEDGRDGIEEEEDEDNAEEHEHESLISDPYHEAGDYSNRSSSCSYRDNEGGDDFDRVVSPSGQPYQSQSFYPESRQSASPSTNHHSMEMELIYDLRGHMEQLYQEMSELKKIIKGCMNMQMELQQTMKVEVHSVKIQEKKSRNRTQKKKGNCCICYEVKVDSVLYRCGHMCACLKCAIELQCNSGKCPICRAKIVDVVRVYIDG 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00219 868 MobiDBLite consensus disorder prediction 427 441 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 1 17 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 204 219 - -
Viun9g00219 868 CDD mRING-HC-C3HC5_NEU1 813 865 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 58 84 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 660 748 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 204 259 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 1 46 - -
Viun9g00219 868 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 791 867 IPR013083 -
Viun9g00219 868 PANTHER BNAC05G24000D PROTEIN 1 867 - -
Viun9g00219 868 ProSiteProfiles Zinc finger RING-type profile. 816 855 IPR001841 -
Viun9g00219 868 Pfam Zinc finger, C3HC4 type (RING finger) 813 860 - -
Viun9g00219 868 SUPERFAMILY RING/U-box 794 860 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 152 178 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 724 748 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 18 36 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 411 532 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 234 259 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 442 495 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 159 178 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 501 532 - -
Viun9g00219 868 MobiDBLite consensus disorder prediction 58 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00219 Viun-Chr9 1346126 1350213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00219 791 865 Miscellaneous Gene Families AT4G39050 32.000 2.22e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00219 - - vun:114162588 1676.37