Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00178 ATGGCTTCTCAGACCTTGCACGACGCAAAGAAATCACAAGCCAGAAGAGCATTACGGTCCCTAGCCATAGGCATCGCAGTTCCCTTCACCCTAACACTCACCATAATCATTCTTTTCGGTTCAGGACGAAGGTACAACAGCATATCAAAGCCCTTCTGGTTTGCACCACTATGGTTCATTCACTTGGCTTCCTTAGGTTCATCTTTCTTCATGGGTCTTGCAGCATGGTTAGTGTGGGCTGATGGTGGCTTCCAAGGAGAAACCGACGCTATGTCGCTTTACATAGCTCATCTTTCTCTCAGCATCGTTTGGCACCCTCTTGTTCTCATCATGGGTGCTTATTGGCTTGCTTTGCTTTCTTGCATCGTCAACTTTGGCACCCTCTTTATGTGCTACTTGAGGTTTAGAAAGGTTAATCCTTTTGCCAAAGATCTAGCCAAACCTTGTTTGGCTTTGGCTTTGTATCTTTCTCTTGTTAGCTTCAAGTTGATGTTTATCTAA 501 0.4491 MASQTLHDAKKSQARRALRSLAIGIAVPFTLTLTIIILFGSGRRYNSISKPFWFAPLWFIHLASLGSSFFMGLAAWLVWADGGFQGETDAMSLYIAHLSLSIVWHPLVLIMGAYWLALLSCIVNFGTLFMCYLRFRKVNPFAKDLAKPCLALALYLSLVSFKLMFI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00178 166 PIRSF PBR 10 166 IPR004307 GO:0016020
Viun9g00178 166 Gene3D TspO/MBR protein 15 165 IPR038330 -
Viun9g00178 166 FunFam translocator protein 2 17 166 - -
Viun9g00178 166 Pfam TspO/MBR family 39 164 IPR004307 GO:0016020
Viun9g00178 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 164 IPR004307 GO:0016020
Viun9g00178 166 CDD TSPO_MBR 21 161 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00178 Viun-Chr9 1093455 1093955 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00178 K05770 - gmx:100790873 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00178 9 1093455 1093955 Viun9g00178 9 1093455 1093955 ECH