Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00163 ATGCTTCTGCAGCGAGACATTATAAATGATTTGACTCATCAGTTTGAAACGAAAAGTTCTTCCACAAAAAAGTTTTGGTTTTGCTCAATCAATTTCATTCAGCATGTGCCACTGCTCCACTCAAATTCCGAGTTAGTTAGGGAAGTAGCTGTTTCTGCCATGGAAGGTAACAAGGACGAAGCATTGCGCTGCGTTCGGATCGCAGAGGAAGCAATCGCGTCGGGGAACAAAGACCGCGCCGTCAAATTCCTCAGAATCGCTCAGCGACTAAACCGCGATTTGCCGATTCAATCATTGCTCCAAAAGTGCGAGGGCCTCGATTCTCAGTCATCCACCGCTGCCGCTCATGGCGCGCAGGCCAGCGGTACTTCTTCGCGGCGCGAACCTTTGAACGGGGAGAGGAGTCACGTGAGTTACACTGAGGAGAACGTTCGGCTGATTAGGGAAATCAAAGGAAAGAGCGACTACTACGCGATTCTTGGATTGGAGAGGAGTTGCTCCGTCGAAGAGATTCGGAAAGCGTATAGGAAGCTCTCGCTGAAGGTTCATCCCGATAAGAACAAAGCGCCGGGCTCAGAAGACGCGTTCAAGAAGGTCTCGAAGGCTTTCAAGTGTTTGAGCGATGACGGTTCTAGAAGAATGTATGACCAGACGGGAACCGTCGATGATTTCGACCAGGGCGAGGTGAATCATTTCCGGCGGAGGAGGAGAAGGACGACGACGGCAACCACGACGCGCGATTTCTTCGAAGACGAGTTCGATCCTGACGAGATATTTAGGGCTTTCTTCGGACACTCCGATGTGTTCGGGAGGAACCATGTTTTCAGGCCCCGCGGCATGGGGAATCCCCATAGGACTGAGGTTAATGATGGATCCGGAGGGAGGCATCACAATGTTATGCTTGTGATTCAGCTTTTGCCGCTTTTGATTATTGTTCTGCTCGCGTACTTACCGTTTTCTGAGCCTGAGTATTCCTTGCACAAGCATTATAACTACCAGATTCCGAAAACGACTGAGCTGCACGGTGTGCAGTTCTTCGTGAAATCGCAGGAGTTTGAAGCGAATTATCCGGTGGGGAGTGATGCTCGTGTGGCGGTTGAGGAAAGTGTGTTAAAGGATTACCGGAGTATGCTTCGGAGATACTGTCAGGTGGAGATGCAGAGGCGGAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGATAAGCTGCAGAACTTTGCAGTCATGGCATGA 1233 0.5028 MLLQRDIINDLTHQFETKSSSTKKFWFCSINFIQHVPLLHSNSELVREVAVSAMEGNKDEALRCVRIAEEAIASGNKDRAVKFLRIAQRLNRDLPIQSLLQKCEGLDSQSSTAAAHGAQASGTSSRREPLNGERSHVSYTEENVRLIREIKGKSDYYAILGLERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTVDDFDQGEVNHFRRRRRRTTTATTTRDFFEDEFDPDEIFRAFFGHSDVFGRNHVFRPRGMGNPHRTEVNDGSGGRHHNVMLVIQLLPLLIIVLLAYLPFSEPEYSLHKHYNYQIPKTTELHGVQFFVKSQEFEANYPVGSDARVAVEESVLKDYRSMLRRYCQVEMQRRSWNRNLPTPHCDKLQNFAVMA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00163 410 Pfam Domain of unknown function (DUF1977) 320 390 IPR015399 -
Viun9g00163 410 MobiDBLite consensus disorder prediction 111 137 - -
Viun9g00163 410 Pfam DnaJ domain 155 216 IPR001623 -
Viun9g00163 410 PANTHER AT29763P-RELATED 54 405 - -
Viun9g00163 410 FunFam Chaperone protein dnaJ 49 151 274 - -
Viun9g00163 410 ProSiteProfiles dnaJ domain profile. 155 219 IPR001623 -
Viun9g00163 410 SMART dnaj_3 154 211 IPR001623 -
Viun9g00163 410 PRINTS DnaJ domain signature 175 190 IPR001623 -
Viun9g00163 410 PRINTS DnaJ domain signature 211 230 IPR001623 -
Viun9g00163 410 PRINTS DnaJ domain signature 191 211 IPR001623 -
Viun9g00163 410 PRINTS DnaJ domain signature 157 175 IPR001623 -
Viun9g00163 410 SUPERFAMILY Chaperone J-domain 151 233 IPR036869 -
Viun9g00163 410 Gene3D DnaJ domain 152 273 IPR036869 -
Viun9g00163 410 MobiDBLite consensus disorder prediction 111 128 - -
Viun9g00163 410 CDD DnaJ 155 208 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00163 Viun-Chr9 1009342 1014154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00163 131 234 Miscellaneous Gene Families AT5G49580 34.545 5.46e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00163 K09518 - gmx:100820432 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00163 9 1009342 1014154 Viun9g00163 9 1009342 1014154 ECH