Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00161 ATGTTGGACCTCAAAAACATATGGGTGCTTGTTTCCATCAACAGGTTCATTCAAGACACCTTGGAAGATGAGAAGACCAGGAATGGTCTGAAATTGAGATGCACCTCCAAGTTAAGGATTCAAAAGCAGGAATTTTTTGAATTCTCTGAGCAGTCAGTGTTGTCCAATCTTTACTGGGGCATTGACAGCATTGAGGCCGCCATTGAAGCTCAAAGGCCAGAAGATAGATCCTTCAGGCTAATGAACTCTGAACAAATGCTTCAGGTGCCAGCAATGCTTGATGAGGAAGAGGTCACAGCCACAATTCCAAACCGTTACTTGGTGTGCTGCTCCTACTTTTACCTCTCAGTGGTGAGGAAGCTACAGGGAGATGAGTGGCAGGCTGCACTGCATTTTCTCCAAGCAGTGTTGGTATCACCAAGGCTTGTTTGGACAGAATTTGCATCACAACTTTGTGAAAGCCTTTTCCCCCAATCGAGCATTCGCATGGTGCAGGGTAACTGCAGCAGTAGAAGTTTGGAATCTGTGTCTTCTGAGGATGAAATGGATGAAGCAATTAGGGAGGTGGCAAGGAGGTACAAGGAGTGTCTGGTGTATTACCAGGTCATGCTTTATGGAGAAACTCCATGGTGGCGCAATTATTGCAGCAAACAATCACCACGTTCTGTGGATGTACCAAATACTAGCTGTGTTTCTTCAACTTCAGTTCAACATGAATCAAGATTGAAAAGTTGCAATATGTATAAAAAGGTTCATCCACTTGATTCTCAAGATGTGATGCATACAATGGAACATGAATCTAGCCAATTCATGGATATTGCTGAATATGAAGGTGACAAGAAGGCCCTTAAACAACTTAAGTCTGTTGAGTATCACGACAAAGAGATTCAAACAATTTCAAGTATCAAAGGTTTCAAAGATATGATGATAGAGGCACACTCTAAGACACCAGTATCAGTGGATGCATTCTATAAGGATTTTAGAGCCAGAAAGAACATGGAAAATGTGGATGACAGAAAAATTTATATACAAACCACAATAACTAAAGCAGATGATCTACCACCAGAAATCCACAACTGGAAGCTACAACAACACTCTGGTTTGCCTCAAGCTCATCAACATCCTATTCAAGAACAGTTGGACAAGAAAAACATAATTAAGCTTGATTCTAGTAGATTCAACAGGTCCATAGAAGATATTACTTTATCTATCTCACAATACAGAGATAAAACTGGAAATACTCCCTTAAATTGTCTTGGAGAGGATGAACTAGATGAGGAAGCATCGAAGCCAAAAAAATTGTTTGATCATGTAACATTTACACCTGTTTGCAAACATAGGCCCAGCCAGAAAAATCAGGAAAATTCCGAGATACAAAGAGTGTATAGCCTACGAAAGTTTGATGAACTTTGTTCAAGCTCCAGAAAGTATTCCCTGCAAGACTTGTCAGAACTGACTGAAAGGAGGATTAGAGAACTGCACTATTCAGAGGTATTAGGAAAATGTGATGAAGAATATACTGTAGACATTGAATCAATTTATGAGAGCCTGATTAATTCATCCGGGGCTACTTATGCTTCCTTAAAGGATGTGATTTTGGATGAGCTGCTAATAGCTATCTCTACTTCCAAAGAGGAAAGAAAAATAAGGGCATCGGTATCTATTCTGACAACAATAATTTCAAGGAACAAGTCAATCATAGAAGATGTCAAGAAGAAAGGTTTAAGGTTGTGTGATCTGGCAAGTGCTCTAAAACAAAATGTGCATGAGGCAGCAATTCTAATTTATTTGATAAATCCTTCACCTATAGATATAAAAACATTGGAACTTCTGCCAATATTAGTGGAGATTGTATGCACTTCAAATAGTTACAAGAATAGGCCAGAGTCACTTCATTTGACACCTCATGCAGCATCGTTGATGATCATTGAAGAGCTAGTAACTTCATTTGACTATGCCACAAATAACATGCATTTGGCTACCATCAGTTCTCCTCATGTTCTCAGTGGATTTCTAGAAGTTGCCAGGAATGATAATCTAGAAGAATTTTTCTCTTTAACCACCATTCTTATAAAATGCATGCAGTATGATGCTCAGTGCAGAAAGTATGTATCACAATTCACTCCACTTGCTCCCTTTATCCACCTTTTGCAGTCAGAAAACACCCGCGCCAAATGCACGGCTCTTGAATTTTTTCATGAAATCCTTTGTACACCTCGATCGTCGGCTATTAGTCTGCTGCAACGAGTACAGCAAGAAAGAAGCATCAATATTATGCAGATACTAATGCATTGTGCACATCAGTTACAACCTGATCACCAGCTTTTAGCAGCAAATATTATGCTTCAGTTAGACATACTGAACTCTCCTGATAAAGGCGTGTTTAGAGAAGAAGCAGTGCAAATTCTTCTCAGGGCAATGACATCAGAAGAAAGCTCAGAGCAGATATTATCTGCATCCATTCTATCAAATCTGGCTGGTACATATGCTTGGACAGGAGAACCATACACAACTGCATGGTTGTTGAGAAAGACAGGTTTGACCTCTCCCTATCACCAGAATATGATAAGGAACTTCAACTGGTTGGATCCGACTCTACAGGATACAAGCACAGATTTGTGGTGCAGTAAAATTGCCAAATGTATCATAAGCCTAGGGGATTCTGTCTTCCATACTTTAGATAGGGTTCTTAGAAGCAAGATAAAGAGGGTTTCTAGAGATTGCCTTGTAGCAATTGCATGGCTTGGATGTCATATATCAAAAAGTCCAGACAGCATCAGTTACTCTGCATCTGAGATTATAGTAAGTGGAGTTGAGCAGTTTCTGCATCCTGGGATGGAGTTGGAGGAAAGACTTCTAGCATGTATGTGCATGTTTAATTATGCCTCCGGAAAAGGAAAGCAAAAACTAATGCATTTCTCGGAAGGAGTAAAGGAATCACTGAGGCGCCTTTCAAATGTTATTTGGATGGCTGAGGAGTTACATAGAGTAGCTGATTTCTTGCTCCCAAACATATCACGTATTTCTTGCGTTCACACACAAATCCTTGAGGCAGGTTGCAGCTTCAGTTTAGCAGTTTGCTCCCTCATCTACTTCAAGGGATTGCTGTTCAGTGGGTATTCAGATGGAACAATCAAGGTTTGGGATATTAGGGGGCACTCAGCCAGTCTTGTGTGGGACATTAAGGAGCACAAGAAGTCTGTGACATGCTTTTCACTTTATGAACCATCGGATTGCCTTATAAGCGGATCCACTGATAAAACCATAAGGGTGTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTTATAGCATTGAAGGAACCAATTCATCATTTGCGAGCTCATGGTGAAACAATTTTTGCTATTGCAGAAAGCCAGGGACTAAAGCTAGTTAATGAATCAAGAGTGAGCAGAGATATTCTCAAAGGTAAGCATGTGAAGTGCATGACGGTGGCTCAAGGAAAGTTATATATTGGATGCACAGATTCAAGCATACAGGAGTATTCCACAACACACAACCGTGAACTAGAGATCAAACCCCCTACAAGGAGCTGGAGAAAGAAAAGTAAGCCCATCAATGCAGTTGTAGCATATAGAGACTGGCTCTACAGTGCAAATAAGCAAGTTCAAGGCACAACATTCAAGGAATGGAAAAGAACTAGGAAACCAAAACTTTCAATTCTTACTGACAAAGGAGATAATGTGGTGGCCATGGAAGTGGTAGAAGACTTCTTGTACCTAATCTCCAGCTCCTCACCAAACAACATTCAGATATGGTTGAGAGGGGCACCAAAAAAGTTGGGGAGAATATCAGCAGGAAGCAAGATAACAAGCATCCTTGCAGCCAATGACATCATTTTTTGTGGTACTGAGACGGGACTAATCAAGGGTTGGATCCCTCTGTAG 3912 0.4054 MLDLKNIWVLVSINRFIQDTLEDEKTRNGLKLRCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIEAQRPEDRSFRLMNSEQMLQVPAMLDEEEVTATIPNRYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPRLVWTEFASQLCESLFPQSSIRMVQGNCSSRSLESVSSEDEMDEAIREVARRYKECLVYYQVMLYGETPWWRNYCSKQSPRSVDVPNTSCVSSTSVQHESRLKSCNMYKKVHPLDSQDVMHTMEHESSQFMDIAEYEGDKKALKQLKSVEYHDKEIQTISSIKGFKDMMIEAHSKTPVSVDAFYKDFRARKNMENVDDRKIYIQTTITKADDLPPEIHNWKLQQHSGLPQAHQHPIQEQLDKKNIIKLDSSRFNRSIEDITLSISQYRDKTGNTPLNCLGEDELDEEASKPKKLFDHVTFTPVCKHRPSQKNQENSEIQRVYSLRKFDELCSSSRKYSLQDLSELTERRIRELHYSEVLGKCDEEYTVDIESIYESLINSSGATYASLKDVILDELLIAISTSKEERKIRASVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSNSYKNRPESLHLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLSGFLEVARNDNLEEFFSLTTILIKCMQYDAQCRKYVSQFTPLAPFIHLLQSENTRAKCTALEFFHEILCTPRSSAISLLQRVQQERSINIMQILMHCAHQLQPDHQLLAANIMLQLDILNSPDKGVFREEAVQILLRAMTSEESSEQILSASILSNLAGTYAWTGEPYTTAWLLRKTGLTSPYHQNMIRNFNWLDPTLQDTSTDLWCSKIAKCIISLGDSVFHTLDRVLRSKIKRVSRDCLVAIAWLGCHISKSPDSISYSASEIIVSGVEQFLHPGMELEERLLACMCMFNYASGKGKQKLMHFSEGVKESLRRLSNVIWMAEELHRVADFLLPNISRISCVHTQILEAGCSFSLAVCSLIYFKGLLFSGYSDGTIKVWDIRGHSASLVWDIKEHKKSVTCFSLYEPSDCLISGSTDKTIRVWKMIQRKLECVEVIALKEPIHHLRAHGETIFAIAESQGLKLVNESRVSRDILKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTHNRELEIKPPTRSWRKKSKPINAVVAYRDWLYSANKQVQGTTFKEWKRTRKPKLSILTDKGDNVVAMEVVEDFLYLISSSSPNNIQIWLRGAPKKLGRISAGSKITSILAANDIIFCGTETGLIKGWIPL 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00161 1303 PANTHER OS04G0584500 PROTEIN 2 1002 - -
Viun9g00161 1303 SUPERFAMILY WD40 repeat-like 1028 1299 IPR036322 GO:0005515
Viun9g00161 1303 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1061 1094 - -
Viun9g00161 1303 ProSiteProfiles Trp-Asp (WD) repeats profile. 1035 1058 IPR001680 GO:0005515
Viun9g00161 1303 Pfam WD domain, G-beta repeat 1059 1093 IPR001680 GO:0005515
Viun9g00161 1303 Pfam WD domain, G-beta repeat 1026 1049 IPR001680 GO:0005515
Viun9g00161 1303 Gene3D - 525 1006 IPR011989 -
Viun9g00161 1303 Gene3D - 1009 1145 IPR015943 GO:0005515
Viun9g00161 1303 SUPERFAMILY ARM repeat 710 977 IPR016024 -
Viun9g00161 1303 ProSiteProfiles Trp-Asp (WD) repeats profile. 1061 1094 IPR001680 GO:0005515
Viun9g00161 1303 SMART WD40_4 1054 1093 IPR001680 GO:0005515
Viun9g00161 1303 SMART WD40_4 1009 1049 IPR001680 GO:0005515
Viun9g00161 1303 SMART WD40_4 1223 1262 IPR001680 GO:0005515
Viun9g00161 1303 Gene3D - 1155 1302 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00161 - - gmx:100782870 2404.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00161 9 993429 1001392 Viun9g00161 9 993429 1001392 ECH