Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00159 ATGGAACATCACAGTTTGTGTTGCTCATTGCAAATATTGACACAACATATCAACACCATCACTGAGCTTATTATCTCACCCTGCCATTGTTTTGCAGTGCTTTTGGTTGCATGTGTTGCAACCCTCTACGCTGCATGCAGAAGAAAAGCACCAATTTATTTGATAGACTTCAACTGCTACTGTCCACCCAGTTCTTATAGGCTACCACTGGCCATGTTTGAAGAGAATCAATTTTATGATGGCATGGATCCAGAGGCTGTTGCTTTCCAATGCAAGATCATGGCCAAATCAGGATTCAGTGAGTTAACGTCAATTTCTCCATCTCTTGCACAGATACCCAAAATCAAAGCTCTCTCCTTTGCCCTTGAGGAAGCTGAAACAATCATGTGTTCAGTGATAGAAAACCTGTTTGAGAAAAACAAGATAAACCCTAAAACCATTGACATACTCATCACTAATAGTAGTGTCTTCTGCCCCACCCCATCTCTCAGTGCCATGGTGGTTAACAAGTTCAGAATGAGGAGCAACATCATGAGTTTCAACCTATCTGGTATGGGATGCAGTGCTGGAATCATTTCAATGAGCCTAGCTAAAGACTTGTTGAGAGTTCATAGAAATTCACTAGCTTTAATAGTAAGCACAGAGACTCTGAGTCTGAATTGGTACACTGGTAAAGTCCCTTCTATGCTGTTATCTAATTGCCTGTTCAGAATGGGTGGGGCAGCTATATTGATGTCTAGTAGGGTCCAAGATAGGCACAAGGCAAAGTATAAACTACAGCATATTGTTAGAACAATCACTGCACAGGATGATGAATCTCATGGCTGTGTTTACCAGCAAGTGGATCCAGAGGACAAAGAAGGTATATCCATATCAAAGAGCATAGTTAATGTGTCTGGAGATGCACTGAAGAAAAACATAGCTTCACTGGGGCCATTGGTTCTGCCTTTGAGGGAGCAATTCTTGTATTTGTTTTCCATAATTTGTCGCAAAATGTGGAGTACTGGAAGAATAAGCATCTACACTCCAAATTTCAACCATGCTTTTGAGCATTTCTGCATACATTCAGGGGGAAGAGCCATCATTCAAGCCGTTGAAACAAACTTGAGGCTGAGGAAACAGGACGTGGAGCCATCAACCATGACTCTCTACAGGTTTGGAAATATTTCATCATCTTCAATTTGGTATGAGCTGAGCTACATAGAAGCAAAAGGGAGGATGAAATGTGGGGACAGAGTGTGGCAAATTGCGTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTGTTTGTGACATGAAACCAGACACAGCCACTACATGGAGGGATACAATTCATTCGTACCCATTGGACATTTTGAGAACAAACTGA 1377 0.4168 MEHHSLCCSLQILTQHINTITELIISPCHCFAVLLVACVATLYAACRRKAPIYLIDFNCYCPPSSYRLPLAMFEENQFYDGMDPEAVAFQCKIMAKSGFSELTSISPSLAQIPKIKALSFALEEAETIMCSVIENLFEKNKINPKTIDILITNSSVFCPTPSLSAMVVNKFRMRSNIMSFNLSGMGCSAGIISMSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDRHKAKYKLQHIVRTITAQDDESHGCVYQQVDPEDKEGISISKSIVNVSGDALKKNIASLGPLVLPLREQFLYLFSIICRKMWSTGRISIYTPNFNHAFEHFCIHSGGRAIIQAVETNLRLRKQDVEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCVCDMKPDTATTWRDTIHSYPLDILRTN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00159 458 PANTHER 3-KETOACYL-COA SYNTHASE 29 453 IPR012392 GO:0006633|GO:0016020|GO:0016747
Viun9g00159 458 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 458 IPR012392 GO:0006633|GO:0016020|GO:0016747
Viun9g00159 458 CDD CHS_like 32 429 - -
Viun9g00159 458 Pfam FAE1/Type III polyketide synthase-like protein 46 332 IPR013601 GO:0006633|GO:0016020|GO:0016747
Viun9g00159 458 SUPERFAMILY Thiolase-like 39 248 IPR016039 GO:0016746
Viun9g00159 458 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 349 430 IPR013747 -
Viun9g00159 458 SUPERFAMILY Thiolase-like 260 431 IPR016039 GO:0016746
Viun9g00159 458 Gene3D - 82 431 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00159 Viun-Chr9 984449 986089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00159 12 452 Acyl Lipid Metabolism Gene Families AT1G71160 52.036 2.13e-165 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00159 K15397 - gmx:100783404 846.269