Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00146 ATGAATGACAAGGAGCGCACGTTTAAGCTTCCAATTGAATCATCGCTTCAGGATTTGGTTACCACGAAGCATCACTTTTCCATCGTTGAAAAACCCGGTTTTCTTTGCACCATCCTCACTTCTTTTTCTTCATTTGAGACAGATACATCACGAATTCCCTTGTTCGCGTTTAGTTGGTGGGATGACAAGGGCACATTCGAGGCCGGTGACACAGCAACAATCAAAGTAAAAGTGCTTGAGAATGCTGATAAGATTGACAAAAAAGTTTTCAACCCCACACTAACTGTGAATGGAAAGGAAGGGAACAGTTCCTACGTGTCTACTGTGTTGTCAGATTTCGAAGGAGACCCAAATGAATGGAAGATCTTCTTCACCCCCATCAGGGTTGGATTGTTTAATGTACTCCTCACTGAGGAGCGTTATAAAGTTGATGATTCATCCTTGCATTTCCAAGTTGAACCAGGGAACATGTACCCTTCTGTGTGTGTTGCATCATGGAAGGGTGTGAGACATGAGTATGAAGCTGGTTCAAAAGCTACGCTTATGGTGCTACTTAAAGATGCATTTGGGAACGGTATCTCTAAGACGACTCAAGTTTCCTATTTGCCTGATTTTAAGTTGTCTGTTTTGCATGAAAATGGTTCTGTTGCAAGTGCTCCAGATATCTTTAACATGGGGTGGACTGAGTTTGATTATATAGTGATTGAGTTTATTGTCACGAAAGCTGGAAAGTTCTCATTGAGCTTAGAAGGAGGAAATCAAACCTTGAAGGGTTCTCCATTACCATTGAAGGTGAATCCAGGAGCTATAGATGTCTCTAACTGTATAGCCAAATGGAACATTGAATCTCATGCATGGCAATTGTCTTCCAAGATGGAAATCTTTATACATCAGTTAGATAAATACGGAAATCTGGTTTCTGGATTGTATCCTTTTGATTTTGAAGTTGTTGAAACTGACACAAACTTGTCGATACCGATATCAGATCTCCATTTTCAAGGAGTGGATGCTGGAATTCAGTTGTTTTCGTTTAGCAATTTTGAGCCAGGGAACTTCCTATTGACAATATATGATTCCAAGCATAATAAAAGCATTTCCAACATGCCATATGGTTATACTGTTTTTATAGGTTACTGTGATGGGGTTAAAAGTGTTGTTAACGGATCAGGTTTAAATGATTCAGTAGCTGGTGTAAAGGAAGAATTCTCTGTGTATTTGAATGACATCTATCAATATCCTTCCCCTGTTCAAGCAAACATACTTCAAGTACAAATTTTAAGAGAAAATGACTCGTACAGAGTTATGCCATTCATATATGCTGTGCTTGACAGTAATGGTATTTTCAAAGATAAACTTCTTGCTATATTCCTGTATGAAATTGATTATTTCATTTTTATTTCAAATGGGAGCGGGAGCTTTATCATGGCAAGTGATTTTCGTGTGAATTACATACCAGAAAAAAGTGGACTTTATGATATTAATGTATATTGTGGAAACATATTATTGAATGAAGGACATTCTTTCCGAAAAGAGGTAAAAGCAGGTGAAGTAAATGTTTCCTTGTCAAGTGTCGTGAGGTTTTCTCCAAAGGTGCCAAAGCTGTTCAAAAATGAAATAATAGTCCAGCTTGTGGATTCATATTTAAACCCTGTCCTCTCCCAACAATCAAGGTTGAAATTGGAGATTGCTTCTGCTAATAGTTCTGGCTTTTCATCTTTGGACATTACAGACAATAAGGATGGATCATACAGCTGCAGTTACATGGTCAAAGATGTTGGAACTTACGACATTTGTGCTTCCTTTGATGGCAAACGTTTCTTATCATGTCCCTTGAGTATCAATGTGTACAGCAGTGAATATTTTCCAAAAGCCAACAATGATACAATATCTATTTGGGAGGACCAATCCATTGCCTTTGATGTCTTAGCAAATGATTATTTTGCTGGTGATGATGCAAGTATGGTTGAATTCTCAAAATCAGGTCACGGTTCACTTATACAGAATGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAATGATTCCTTTTGGTATACAATTTCTGATATAAATGGAAATCTTGCTTCTGCTACGGTGTGCATTTTTGTTCTCAATGTTCCACCTCAGTTTGTTTCTGCTCCAAATCAACTACAAGCAACAGAAGATTTAATAAGTCCTAGATTTGGTGGTTTCACCGGGTTTGAGATAACTTATTCAAATCCTATGGAAAATATTTCTGTGAATCTTAGTGCTCAATCTGGAATTGTGCTTCTGTCTCCCATGGCTATGCAATTTGGGCAAGTAATGTGGAGTGAACTTACAGTTGACATGGGAAATGAAACTGCAACCAGTTTAATAATAGAGGGCTCTGTGGAAGTAATTAATTTTGCACTTCAGTCAATTCAGTATCTGGGAAATGAAAATTTTTATGGAGGAGATACCATTCAAGTCTCAACCAGGAATAAGAACGGAGTAAATTCAGTAGGTGTTCCAATTTTCGTTGATCCTATCAATGACCCTCCATTTATTAGAGCCCCCTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACCAAGAGAAAGACAAGTTTGACTTTTCCATTGGAGATCCCGATCTTCTTACTTTTCCTGGTGGTGAGGCTCACTTTTTTGTGACGTTCTCCATGGAAGTAAATGATGGATGGTTAGTGGCAAACCTACCAGTTCATTTGATCAATACAACTGAATTGAAGCACAGAATTAATTATCAGTGGCAGCCTCTTCAGACATATGTTACTATCTCAGAGCACTTTATGGTCAAAGCTCATGGAATCAGATTTCAGGGCACAATCAATGACTGCAACAGTGTTATGCAACAACTGTTCTATCATGGAGGTGAACATGGAGCTGTTTTAACAATGACATTAAATGACATGGGAAACTACGGATGTTATCCAGATTGTGCAGATGGCATGTCAATGCCATTATACGCAGAAGTTACAGTAAATTTAATGAGAAAACAACCAATGAGTTCATTTCTGGCTCACACATTAGGATCAATCATTGTCATTGAATTTGTTATCATATTCTCTCTTGGAGCCTTGCTTCTGTATTTCACCTGTAAATGTGCAATTCTTCTTGCACATGAAAGAAGAAACAGAGAGAAAAGGTCTTCAGAGTTATCTACTTCCCAGAGTTTCCCCACAGAAACTAAAGATTTAAGAGTTTGGAAGGTATACATGGGAAAGTTAAAGGAGAAAATGGTTAATGATTTCTTTGCAGAAATGGTGTTTTCTGTTCAGTTAAGTTTACTCTCTTCAGTGATTCAGTTAACTGATTATACTTAA 3348 0.3769 MNDKERTFKLPIESSLQDLVTTKHHFSIVEKPGFLCTILTSFSSFETDTSRIPLFAFSWWDDKGTFEAGDTATIKVKVLENADKIDKKVFNPTLTVNGKEGNSSYVSTVLSDFEGDPNEWKIFFTPIRVGLFNVLLTEERYKVDDSSLHFQVEPGNMYPSVCVASWKGVRHEYEAGSKATLMVLLKDAFGNGISKTTQVSYLPDFKLSVLHENGSVASAPDIFNMGWTEFDYIVIEFIVTKAGKFSLSLEGGNQTLKGSPLPLKVNPGAIDVSNCIAKWNIESHAWQLSSKMEIFIHQLDKYGNLVSGLYPFDFEVVETDTNLSIPISDLHFQGVDAGIQLFSFSNFEPGNFLLTIYDSKHNKSISNMPYGYTVFIGYCDGVKSVVNGSGLNDSVAGVKEEFSVYLNDIYQYPSPVQANILQVQILRENDSYRVMPFIYAVLDSNGIFKDKLLAIFLYEIDYFIFISNGSGSFIMASDFRVNYIPEKSGLYDINVYCGNILLNEGHSFRKEVKAGEVNVSLSSVVRFSPKVPKLFKNEIIVQLVDSYLNPVLSQQSRLKLEIASANSSGFSSLDITDNKDGSYSCSYMVKDVGTYDICASFDGKRFLSCPLSINVYSSEYFPKANNDTISIWEDQSIAFDVLANDYFAGDDASMVEFSKSGHGSLIQNGRIFRYTPYKGYYGNDSFWYTISDINGNLASATVCIFVLNVPPQFVSAPNQLQATEDLISPRFGGFTGFEITYSNPMENISVNLSAQSGIVLLSPMAMQFGQVMWSELTVDMGNETATSLIIEGSVEVINFALQSIQYLGNENFYGGDTIQVSTRNKNGVNSVGVPIFVDPINDPPFIRAPYFIILRSNEDETLIFDQEKDKFDFSIGDPDLLTFPGGEAHFFVTFSMEVNDGWLVANLPVHLINTTELKHRINYQWQPLQTYVTISEHFMVKAHGIRFQGTINDCNSVMQQLFYHGGEHGAVLTMTLNDMGNYGCYPDCADGMSMPLYAEVTVNLMRKQPMSSFLAHTLGSIIVIEFVIIFSLGALLLYFTCKCAILLAHERRNREKRSSELSTSQSFPTETKDLRVWKVYMGKLKEKMVNDFFAEMVFSVQLSLLSSVIQLTDYT 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00146 1115 Gene3D - 622 703 - -
Viun9g00146 1115 ProSiteProfiles Filamin/ABP280 repeat profile. 544 615 IPR017868 -
Viun9g00146 1115 PANTHER JITTERBUG, ISOFORM N 774 1077 IPR044801 GO:0030036|GO:0051015
Viun9g00146 1115 SUPERFAMILY E set domains 537 618 IPR014756 -
Viun9g00146 1115 Gene3D Immunoglobulins 536 621 IPR013783 -
Viun9g00146 1115 Gene3D Immunoglobulins 373 523 IPR013783 -
Viun9g00146 1115 Gene3D Immunoglobulins 156 274 IPR013783 -
Viun9g00146 1115 ProSiteProfiles Filamin/ABP280 repeat profile. 376 512 IPR017868 -
Viun9g00146 1115 Pfam Bacterial Ig domain 612 695 - -
Viun9g00146 1115 SUPERFAMILY E set domains 158 275 IPR014756 -
Viun9g00146 1115 Pfam Filamin/ABP280 repeat 378 499 IPR017868 -
Viun9g00146 1115 Pfam Filamin/ABP280 repeat 537 610 IPR017868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00146 Viun-Chr9 908559 918332 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00146 - - gmx:100786794 1786.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00146 9 908559 918332 Viun9g00146 9 908559 918332 ECH