Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00140 ATGACTAAGAGTACCTTGGAACCCGGGGGGAGTGGAGGCGGTGGCTTTCACGCTGTTCACGCGGAGCGTGACCTAGAATCTAATTGGGAAGTTGACCTCGCCAAAAAACTTGAGGAGTATTTGCTGAAAATTTGTTCAGGCGAGATCACTGGCGAGGAAGAAGGACATATTCCTGTGAACTTTGCCGAAGCTGCTCTACTGCTTCAGGGTTCCATACAGGTCTATAGTCGAAAGGTGGAGTACCTATACACCTTGGTCTTGCGTGCTTTGGAGTTCCTTTCCCAGAAAAGACAGCAGGATCATAAAGATGGGGAACCGGTCCAACCTGAAGAAATGGGTTCCCATGCTGTTGCTGATGAGGAAAATGATCAATTCTGGGGCTTAGATGACATCCAAGTTGAAGAAAAGAATTCCTTGGATGGCACAACCGGCAAAGAAGTGAATTTAGATCACTTTATAAAACCTCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGAGAATTGGAGTCTTTTCTGTTGTCAACCACAGACCTGTTCCGGGACTTCATCTTATTGGACACGTCTGATGCTGTTGCAGTTCATGAGTTTTTGGAGGGTACGAAAGCTGCCAAAACTCGAAATGATGCTAGTAGAAGAACCCCAGGTCGTAAAACCTTTCTTTCTCCTGGACGTAGTGGTGGAAGTGCTCGTAGATTATCTGCTGCTAAGAGTCAGTGTGCGAATTCCAACTGCTCCCCTAAACTTAAAAGTGGTTTTGATGATGAAAATGCCGGACCCAGTTTTCCTGCTTCTGATGGTCTTGATGACTGCAATTATGGATTTGATATGGGTCATGGATGTGATGCATCTAGGGATTCAGACAATTCAGATGACGATAATGATGATCCATGGAAACCTCTAAATCCTCATGAACAGGGCAACTTGAGGGTGAAGCCATTCAGAAAAGGGAAAATTTTAAAAAAGAATAACATAAATGTGAGACAACCAGTTCCTATGGGCTCCTTGTTTCCACTTGCAAAATTGCATGGCCCTATCAGTCCAGAGCTCGTGGAACTGTGGGAGAGGCAACATAATGCCCATGAAAGACAAAGGGATTCTCAAGCTCCATTCTATGAGAAGCTGAGGCAATCTCTTGTTAACGAGGGGAATGAAACTGGTGTAACATTTAACACTGAAGGGGACAATGATGACATTGAACATGATAGTGGAATTCCTGATTTTGATATGCCAGACAATGCTTTCATGGAAGAAAATCTACCACCTTTCGGTAACGAGCCTGAGTTTGATGATGCTGATGTCAATGTTGATGAAGCCGTAGATCTTTCTCAGGCAAGTTTGGAAGATCTTTGCCGCTCTCATCTGAATGCTCTCCTAGCAAGCATTGCTGAAACTGAGACGCAGACTGAAATGGCTGCTAGGGTTTCAACGTGGAAACAAAGAATTGAACATAATTTGGAAGAACAGGAATCACATCCACCATTTGATATCCAAGATTATGGTGAAAGACTTCTTGACAAGTTCTCCCTGCTCTCCCTTGAAGCAAGCAGTAGCCGTGTCCTGTCCTTTTCTGATTTGGTCAAAGGTCAAGAAAAGTATGACGTGGCCCGAAGTTTTTCTTCCCTTCTTCAACTGGTAAACAACGGAGAAGTATCTCTAGAGAGAAATGGAATTGATGGGAAGTCTGTCTGCTACACATCTGTTAATCCCTTTCATGTTAGGCTCCTTAAGCATGGTAAGGAACGGGAGGATGCACAGTTTGCTTTGCCAAAAAAGAGAGCAAAGTCTCCAAACAAACCCTCTACAAAAGGTGATAAGAACCAAACTGAAAGACAAAAGTCATCAACGAAAAATCATTCTGCAAAACGTCATAAGAACAAATTTAAAAGAGAAAAATCTCCCACATCTTCTAGGAAAAATGGATCTGCTGGTGTGTCACCACCAACAAATTGTAAACTTTCTGTAAAGCTTGGAAAGGTGAGTGCGATAAAGTTATCTCCTGAAGCCAAAAGAAGGCGTAGATCTCAGTATGTTGAACCAGTTAATTTACATTCAGCAGGGTGA 2085 0.4326 MTKSTLEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHKDGEPVQPEEMGSHAVADEENDQFWGLDDIQVEEKNSLDGTTGKEVNLDHFIKPPANLVVLEGDCLDAGGDGGELESFLLSTTDLFRDFILLDTSDAVAVHEFLEGTKAAKTRNDASRRTPGRKTFLSPGRSGGSARRLSAAKSQCANSNCSPKLKSGFDDENAGPSFPASDGLDDCNYGFDMGHGCDASRDSDNSDDDNDDPWKPLNPHEQGNLRVKPFRKGKILKKNNINVRQPVPMGSLFPLAKLHGPISPELVELWERQHNAHERQRDSQAPFYEKLRQSLVNEGNETGVTFNTEGDNDDIEHDSGIPDFDMPDNAFMEENLPPFGNEPEFDDADVNVDEAVDLSQASLEDLCRSHLNALLASIAETETQTEMAARVSTWKQRIEHNLEEQESHPPFDIQDYGERLLDKFSLLSLEASSSRVLSFSDLVKGQEKYDVARSFSSLLQLVNNGEVSLERNGIDGKSVCYTSVNPFHVRLLKHGKEREDAQFALPKKRAKSPNKPSTKGDKNQTERQKSSTKNHSAKRHKNKFKREKSPTSSRKNGSAGVSPPTNCKLSVKLGKVSAIKLSPEAKRRRRSQYVEPVNLHSAG 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00140 694 MobiDBLite consensus disorder prediction 605 623 - -
Viun9g00140 694 MobiDBLite consensus disorder prediction 239 257 - -
Viun9g00140 694 MobiDBLite consensus disorder prediction 289 318 - -
Viun9g00140 694 MobiDBLite consensus disorder prediction 289 307 - -
Viun9g00140 694 MobiDBLite consensus disorder prediction 624 639 - -
Viun9g00140 694 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 15 688 IPR031739 GO:0030261
Viun9g00140 694 Gene3D Structural maintenance of chromosome 1. Chain E 503 567 IPR023093 -
Viun9g00140 694 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Viun9g00140 694 MobiDBLite consensus disorder prediction 594 694 - -
Viun9g00140 694 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 300 IPR031719 -
Viun9g00140 694 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 304 591 IPR031737 -
Viun9g00140 694 MobiDBLite consensus disorder prediction 212 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00140 Viun-Chr9 891946 896643 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00140 K11490 - gmx:100786571 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00140 9 891946 896643 Viun9g00140 9 891946 896643 ECH