Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00138 ATGGCGCGGAACACAGCAGACCTTGTAGCGCAACTCGATGTTGCTAATCACTTTCCCTACGACTCTCTCATCCGCTACTGTTCTTCCAACATTTCGGGGTTCCCTCAACCCCCTACTCAGTTCACCGTTTCGCAGTTTGGGCATGGACAATCCAACCCCACTTACTTGTTGGAAGCGGGTTCTCATGACTCCGTCGTGAAGCGCTATGTTCTCAGGAAGAAACCTGCCGGGAAATTGCTCGCTTCAGCTCATGCCGTTGAAAGAGAATTTCAGGTTCTCCAGGCATTGGGTGCTCATACCAAAGTTCCAGTTCCTAAGGTTTTCTGTTTGTGCAACGATCCAAGTGTTATTGGAACCGCGTTTTATATCATGGAATATTTGGAGGGGCGCATATTTATTGACTCTAAGTTACCGGGTGTGGCACCTCAGAGGAGGAGTGCAATTTACAGGGCAACTGCTAAAGCCTTAGCTTCCTTACATTCTGCTAATGTGGACTCCATTGGTCTGGGAAAATATGGACAACGCAATAATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTTGCCTCAACCAGTGAGGGTAAACCTGCAAGTAATCCAAAAATGTTTGCCTTGATTGATTGGCTACGACATCAAATCCCCTCTGAAGATTCTTCAGGAGCAACAGGTGGTCTGGTTCATGGAGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATACTTGACTGGGAACTGTCTACCCTTGGTAACCAAATGTGTGATGTTGCATATAGCTGTATGACTTATATTGCAGATATTGGGTCTGAAAACGTGCGTGAAGGTATGGAACGTTCTGGACTACCTGAGGGGATTCCTTCACTACCAGAATATTTGGCTGATTACTGTTCCCTAGCAGAAAGAAAATGGCCTGTTGCTGAATGGAAGTTCTATGTTGCCTTTTCTTTGTTCAGGGGCGCTTCAATTTATACAGGAGTTTATAATAGATGGGTTAAGGGTAATGCATCAGGGGGTGAGCGTGCTCGGCACACTGGAGTACTTGCTAACGGCCTTATAGATGCTGCTTGGGAATTTATTGGACAAAATTCCGTGCTTCCTCAGCATCCTCCCTCAGATGCGAATGTACGAGACTATTCAAAAGAGTTTGTGAATGGGAATGATGCACAGGGCCACTCAAATCAGGGGAAATTTGTTCCTAGTCAAAAGGTTTTGGAACTGAGGAAAAAATTAATTAAGTTCATGGAGGAACACATTTACCCCATGGAAAATGAATTTTATAAGCTTGCCCAATCAGACTCGCGGTGGACTGTTCACCCAGAAGAGGAAAAGTTAAAGGAGATGGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCAGAGAGAGCAAGAAGCCTTATCTTTGATGGGAGCAATAATCATCTGTCTACCAATGCAAATGATTTGTTATTGGGGGCTGGTCTCACTAATCTCGAATACGGATACCTTTGTGAGATCATGGGTCGTTCCATTTGGGCTCCACAAGTATTTAATTGTGGTGCACCTGACACAGGTAATATGGAGGTATTACTGCGTTATGGAAATAAAGAACAACTACAAGAATGGCTAGTTCCTTTGCTTGAGGGGACGATTAGGTCTGGATTTGCTATGACAGAACCACAAGTAGCATCTTCTGATGCAACCAATATTGAGTGTTCTATTAAAAGGCAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGTGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTCATGGGGAAAACTGACTTCAACGCAGCGAAGCATAAACAACAATCGATGATCTTAGTAGATGTCCAGACTCCTGGTGTTCACATAAAGAGACCATTGACGGTGTTTGGCTTTGATGATGCTCCTCATGGGCATGCAGAAATAACATTTGAAAATGTTTGTGTGCCGGCAAAAAACATCATACTGGGTGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTTGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGTTGCCGAGCGAGGCATGCAGTTGATGGTTCAAAGAGCCATCAGTAGAAAAACATTTGGGAAGTTCATTGCTCAACATGGTTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTAGAGAGGACCAGATTGTTAGTGTTGGAAGCCGCTGACCAACTTGATAGGCTTGGGAACAAAAATGCTCGGGGCATACTAGCAATGGCAAAGGTAGCTGCACCGAACATGGCACTGAAGGTGCTTGACATGGCAATGCAAGTGCATGGAGCAGCTGGTGTTTCATCTGAAACTGTTCTGGCTCATCTCTGGGCAGCTTCAAGGACACTGAGAATTGCTGATGGTCCAGATGAAGTTCACTTGGGAACCATTGCCAAGTTAGAACTGCAAAAAGCCAAGCTTTGA 2487 0.4443 MARNTADLVAQLDVANHFPYDSLIRYCSSNISGFPQPPTQFTVSQFGHGQSNPTYLLEAGSHDSVVKRYVLRKKPAGKLLASAHAVEREFQVLQALGAHTKVPVPKVFCLCNDPSVIGTAFYIMEYLEGRIFIDSKLPGVAPQRRSAIYRATAKALASLHSANVDSIGLGKYGQRNNYCKRQIERWAKQYVASTSEGKPASNPKMFALIDWLRHQIPSEDSSGATGGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMTYIADIGSENVREGMERSGLPEGIPSLPEYLADYCSLAERKWPVAEWKFYVAFSLFRGASIYTGVYNRWVKGNASGGERARHTGVLANGLIDAAWEFIGQNSVLPQHPPSDANVRDYSKEFVNGNDAQGHSNQGKFVPSQKVLELRKKLIKFMEEHIYPMENEFYKLAQSDSRWTVHPEEEKLKEMAKKEGLWNLWIPLDSAERARSLIFDGSNNHLSTNANDLLLGAGLTNLEYGYLCEIMGRSIWAPQVFNCGAPDTGNMEVLLRYGNKEQLQEWLVPLLEGTIRSGFAMTEPQVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDVQTPGVHIKRPLTVFGFDDAPHGHAEITFENVCVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMQLMVQRAISRKTFGKFIAQHGSFLSDMAKCRIELERTRLLVLEAADQLDRLGNKNARGILAMAKVAAPNMALKVLDMAMQVHGAAGVSSETVLAHLWAASRTLRIADGPDEVHLGTIAKLELQKAKL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00138 828 Gene3D - 129 372 - -
Viun9g00138 828 Gene3D - 407 556 IPR037069 GO:0016627|GO:0050660
Viun9g00138 828 Pfam Phosphotransferase enzyme family 43 290 IPR002575 -
Viun9g00138 828 FunFam Acyl-CoA dehydrogenase fadE12 558 676 - -
Viun9g00138 828 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 81 825 - -
Viun9g00138 828 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 406 685 IPR009100 GO:0016627
Viun9g00138 828 Pfam Acyl-CoA dehydrogenase, N-terminal domain 414 554 IPR013786 GO:0016627|GO:0050660
Viun9g00138 828 SUPERFAMILY Protein kinase-like (PK-like) 40 343 IPR011009 -
Viun9g00138 828 Pfam Acyl-CoA dehydrogenase, middle domain 559 660 IPR006091 GO:0016627
Viun9g00138 828 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 670 824 IPR036250 GO:0016627
Viun9g00138 828 Pfam Acyl-CoA dehydrogenase, C-terminal domain 672 820 IPR009075 GO:0016627
Viun9g00138 828 Gene3D - 558 672 IPR046373 GO:0016627
Viun9g00138 828 Gene3D - 673 827 - -
Viun9g00138 828 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Viun9g00138 828 CDD ACAD10_11_N-like 42 308 IPR041726 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00138 1 826 Acyl Lipid Metabolism Gene Families AT3G06810 76.236 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00138 K00249 - gmx:100788184 1530.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00138 9 876242 884539 Viun9g00138 9 876242 884539 ECH