Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00137 ATGCCAGTTTCCAGCGTGAGAGAGAGGGTGCAAGACACCCTCTCTAACCACCGGAACGAGTTGATCTCTCTTCTCTCAAGTTATGTTACTGGGGGCAAAGGATTACTACAACCACATGACTTACTGGATCATGTTGAAAAGATTCTTCAAGAGGATGAAGGGATGCAGAAACTCAAAGAAGGTCCCTTTGTTCAAGAGCTAGAATCTGCACAGGAAGCCATAATTCTACCACCTTTTGTGTCTATAGCTTTGCGTCCAAGACCTGGTGTTTGGGAGTATTTTCGGATTAATGCATTTGAACTCAGTGTAGATAGTCTGAATGTTGCAGAGTATCTCCGATTCAAAGAAGAACTAGTAGATGGAGAGTGCAGTGACAAGTATATGCTTGAACTAGACTTTGAGCCATTTAATGCGACATTCCCTAGACCAACTCGATCATCCTCTATTGGTAATGGTGTTCAATTTCTCAACCGTCATCTGTCATCATTCATGTTTCGTAACGAAGAAAGTTTGGATCCTCTCCTCGCATTTTTACGCTCACACAGATATGATGGTCATGCAATGATGGTAAATAACCGGATTCATAACATATCCAACCTTCAGTCTTCCTTGGCAAGGGCAGAAGAAATACTTTCGAATCTCCAACCCAATACACCGTATTCTGGCTTTGAATATGAACTACAAGGATTGGGATTTGAGAGAGGTTGGGGTGATACAGCAGAGAGCGTGTTAAACATGGTGCATCTTCTACTAGACATCCTTCAAGCTCCTGATCCAAACATCGTAGAGTCATTTCTGGGAAGAATTCCTATGGTTTTCAATGTTGTAATTGTATCACCAGCTGGTTACTTTGGCCAAGTAAATATTCTGGGCTTGCCTGATACTGGTGGACAGATTGTTTATATACTTGATCAAGTTCGTGCTTTAGAGAAGGAGATGCTGGTCAGAATTCAAAAACAAGGACTTGATGATGTGTCTCCAAAAATTCTGATAGTTACTAGATTGATACCAGAGGCAAAAGGGACAACTTGCAATCAGAGACTGGAAAGAGTTAGTGGAACTGAGCATTCATATATACTGAGAGTACCCTTTAGAACTAAGAATGGAATTTTGAGAAAATGGATTTCAAGGTTTGACATGTGGCCTTATCTAGAGACATTTGCAGAGGATGCATCACACGAAATTGCAGCTGAGTTACAAGGAATTCCTGATCTGGTAATTGGCAACTACAGTCATGGAAATCTTGTTGCAACCTTGTTATCTTATAAGCTAGGAATCACACAGTGCAATATAGCTCATTCATTGGAGAAGACTAAGCATCCTGGCTCTGATATATATTGGAAAAAGTATGAAGACAAGTACCATTTTTCTTGTCAATTCACAGCTGATCTTATTGCAATGAACAATGCGGATTTTATAATCACTAGTACATACCAAGAAATTGCAGGAAGCAAGAACAATGTTGGACAATATGAGAGCCACTCTGCCTTCACTCTTCCAGGACTCTATCGTGTTGTTCATGGCATTGATGTTTTTGATCCTAAGTTTAATATCGTGTCTCCTGGTGCAGACATGGGCATATATTTTCCATTCTCAGACAGAGAAAAGAGGCTAACTTCTCTCCATGGCTCGATTCAAGAACTTATATATGGTGATGAACAGAATGAAGAACATGTTGGCTCGATAAATGATAGAGCAAAGCCAATTATCTTTTCTATGGCAAAACTTCTTCCAGTGAAGAACATAACCGGGCTTGTTGAATGCTTTGGTAAAAGCTCCAAGTTGAGAGAACTTGTGAATCTTGTGGTAGTAGGTGGCAACATTGATGCACAAAAGTCTAGGGACACAGAAGAAATGGGGGAGATAGAGAAAATGCATAGCCTCATAGAAAAATATAACTTGCACGGCCAATTTCGTTGGATAAAGGCCCAAGTGAACCGTGCTCGTAATGGAGAGCTCTACCGTTGTATTGCTGATGTCAAAGGTGCTTTTGTGCAGCCTGCATTTTATGAAGGGTTTGGTCTAACAGTTGTGGAAGCAATGACTTGTGGTCTTCCTACATTTGCCACTTGTCATGGTGGCCCTGCTGAGATAATTGAGCATGGAGTTTCTGGATTTCATATTGAGCCACATCATCCGGATGAAGTTGCTGCAAATTTAATAAACTTTTTTGAGCAATGCCAGCATGATCCTGCCAACTGGAACAAGATTTCTGATGCAGCTCTAAGCCGCATTCATCAGAGGTATACATGGAAGATATACTCTGAGAGGCTTCTCACTTTAGCTGGTGTCTATGGATTCTGGAAGCATGTCTCGAAGCTTGAGAGGAGAGAAACTAGACGATACTTGGAGATGTTCTACATTCTCAAGTTCCGGGATTTGGTACAGGGAATTCCGATGGCGGTTGAATAG 2412 0.4117 MPVSSVRERVQDTLSNHRNELISLLSSYVTGGKGLLQPHDLLDHVEKILQEDEGMQKLKEGPFVQELESAQEAIILPPFVSIALRPRPGVWEYFRINAFELSVDSLNVAEYLRFKEELVDGECSDKYMLELDFEPFNATFPRPTRSSSIGNGVQFLNRHLSSFMFRNEESLDPLLAFLRSHRYDGHAMMVNNRIHNISNLQSSLARAEEILSNLQPNTPYSGFEYELQGLGFERGWGDTAESVLNMVHLLLDILQAPDPNIVESFLGRIPMVFNVVIVSPAGYFGQVNILGLPDTGGQIVYILDQVRALEKEMLVRIQKQGLDDVSPKILIVTRLIPEAKGTTCNQRLERVSGTEHSYILRVPFRTKNGILRKWISRFDMWPYLETFAEDASHEIAAELQGIPDLVIGNYSHGNLVATLLSYKLGITQCNIAHSLEKTKHPGSDIYWKKYEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHSAFTLPGLYRVVHGIDVFDPKFNIVSPGADMGIYFPFSDREKRLTSLHGSIQELIYGDEQNEEHVGSINDRAKPIIFSMAKLLPVKNITGLVECFGKSSKLRELVNLVVVGGNIDAQKSRDTEEMGEIEKMHSLIEKYNLHGQFRWIKAQVNRARNGELYRCIADVKGAFVQPAFYEGFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIEPHHPDEVAANLINFFEQCQHDPANWNKISDAALSRIHQRYTWKIYSERLLTLAGVYGFWKHVSKLERRETRRYLEMFYILKFRDLVQGIPMAVE 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00137 803 Pfam Glycosyl transferases group 1 556 737 IPR001296 GO:0016757
Viun9g00137 803 Gene3D Glycogen Phosphorylase B; 524 751 - -
Viun9g00137 803 Gene3D - 4 141 - -
Viun9g00137 803 PANTHER - 4 801 IPR012820 GO:0005985|GO:0016157
Viun9g00137 803 Gene3D Glycogen Phosphorylase B; 276 794 - -
Viun9g00137 803 Pfam Sucrose synthase 4 550 IPR000368 GO:0005985|GO:0016157
Viun9g00137 803 NCBIfam sucrose synthase 18 800 IPR012820 GO:0005985|GO:0016157
Viun9g00137 803 FunFam Sucrose synthase 142 271 - -
Viun9g00137 803 FunFam Sucrose synthase 524 751 - -
Viun9g00137 803 Gene3D - 142 271 - -
Viun9g00137 803 FunFam Sucrose synthase 5 141 - -
Viun9g00137 803 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 291 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00137 Viun-Chr9 869763 874533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00137 3 803 Glycosyltransferase AT4G02280 72.160 0.0 1263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00137 K00695 - gmx:100788717 1429.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00137 9 869763 874533 Viun9g00137 9 869763 874533 ECH