Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00124 ATGGTAATTGTGACTACTGAAAGTGATCTAGTTTCTGCAGTGGCACCTGCAAGACTATACAAAGCCATTGTCCTTGATTCTTCCAATTTTTTCCCCAAAGCTTTACCAGACTTTGTTAAAAGTGTTGAAATCATTGAAGGAAATGGAGGGCCAGGAACCATCAAGAAGTTCACTCTTCCTGAAGGGTATGTGAAGCAAAAGGTGGATGTGGTGGATGAAGAAAACTATGTGTATCAGTACACAATAGTTGAAGGGGATCTTCTGACAGAGCCATTGGAGAAGGTGTGTAATGAGTACAAACTGGTGCCAAATTCTGATGGAGGATGCATTGTGAAGGCCACACGCAAATACTACACAAAAGGAGATGCTGAACTCACACAAGACTTTCTCAACTCTACCAATCAAATGTCTGCACTGTTTGCCAAAGCTGTTGATGATTATCTTTTGGCTAATCCTGATTACAATTGA 468 0.4081 MVIVTTESDLVSAVAPARLYKAIVLDSSNFFPKALPDFVKSVEIIEGNGGPGTIKKFTLPEGYVKQKVDVVDEENYVYQYTIVEGDLLTEPLEKVCNEYKLVPNSDGGCIVKATRKYYTKGDAELTQDFLNSTNQMSALFAKAVDDYLLANPDYN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00124 155 SMART Bet_v_1_2 5 151 IPR000916 GO:0006952
Viun9g00124 155 FunFam Major pollen allergen Bet v 1-A 1 155 - -
Viun9g00124 155 CDD Bet_v1-like 5 148 - -
Viun9g00124 155 PRINTS Major pollen allergen Bet V1 signature 106 122 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 PRINTS Major pollen allergen Bet V1 signature 81 94 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 PRINTS Major pollen allergen Bet V1 signature 62 81 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 PRINTS Major pollen allergen Bet V1 signature 140 150 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 85 117 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Viun9g00124 155 Pfam Pathogenesis-related protein Bet v 1 family 4 151 IPR000916 GO:0006952
Viun9g00124 155 PANTHER - 1 153 - -
Viun9g00124 155 Gene3D - 1 155 IPR023393 -
Viun9g00124 155 SUPERFAMILY Bet v1-like 5 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00124 Viun-Chr9 742055 743130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00124 - - aprc:113852251 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00124 9 742055 743130 Viun9g00124 9 742055 743130 ECH