Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00101 ATGGCTTCTCAGAACCACAAAAAATTACTACCCATTTTGCTAGTGCTGCTCTGCGTCGCACTGTCCTTCCCAAGGCCAACCCAGGGGAGGGTGCCCTTTGCATGCGACCCTAGCAACGGACTCACGAGGGGGTTCAAGTTCTGCAACACGCACGTCCCCATCCACGTGAGGGTTCAGGACCTCATAGCCAGACTCACATTGCCGGAAAAGATCAGGCTCGTCGTCAACAACGCCATCGCCGTGCCCCGGCTCGGTATCCAGGGCTACGAGTGGTGGTCGGAGGCGCTTCACGGCGTCTCCAATGTGGGCCCCGGCACCAAGTTCGGTGGGGCCTTCCCCGGCGCCACCATGTTCCCCCAGGTCATCACAACCGCTGCTTCCTTCAATCAATCTCTCTGGCGCCAAATCGGACGGGTGGTGTCTGATGAAGCAAGGGCAATGTACAACGGTGGACAGGCTGGTTTGACGTATTGGAGTCCCAATGTCAACATTTTTCGCGACCCACGGTGGGGCCGCGGCCAAGAGACTCCCGGCGAAGACCCAACCCTCGCCGCAAAATACGCCGCCAGCTATGTCCAAGGTCTCCAAGGCGACGGCGCCGGCAACCGCCTCAAGGTCGCTGCTTGTTGTAAACACTACACTGCCTATGACCTTGACAACTGGAACGGTGTCGACAGGTTTCATTTCAATGCCAAGGTAAGCAAACAGGATCTGGAGGACACTTACGACGTGCCATTTAAAGCGTGTGTTTTGGAAGGACACGTGGCGAGTGTGATGTGTTCTTACAATCAGGTGAATGGCAAGCCCACGTGTGCCGACCCTGATCTCCTTCGCAACACCATACGCGGCCAATGGGGCCTCAATGGGTACATAGTCTCGGACTGTGACTCGGTTGGGGTTTTCTATGACAACCAACACTACACTAGAACACCCGAGGAGGCCGCAGCGGAGGCCATAAAAGCGGGCCTGGACTTGGACTGTGGCCCATTCTTGGCCATCCACACCGATGCTGCCATCAGGAAGGGACTCATTTCCGAAAACGATCTTAACCTTGCGTTGGCCAACCTTATCACGGTCCAAATGAGATTGGGCATGTTCGACGGCGAACCCTCGGCCCAACCATACGGAAACCTGGGCCCCAGAGACGTGTGCACCCCGGCCCATCAAAACCTGGCCCTTCAAGCAGCCAGAGAGAGCATTGTTTTGTTACAAAACAAAAGAAACTCCTTACCACTATCCCCTGCGCGAATCCGCACCGTAGGTGTCATTGGACCCAATTCGGACGCCACCGTTACAATGATAGGGAATTATGCGGGTGTGGCGTGTGGTTATACGAGTCCTTTGCAAGGGATTGCGAGGTATGTGAAGACTTCACATCAAGTTGGATGCAGGAATGTGGCTTGTAGGGGAAACGAACTATTCGGGGCAGCAGAGACCGTGGCTAAGCAAGTTGACGCCACTGTCTTGGTAATGGGCCTTGACCAGTCCATAGAAGCCGAAACGAGAGATAGACTTGGGCTTCTCTTACCGGGCCTTCAGCAAGAGCTCGTTGCCAGGGTGGCTAGGGCCGCCAGAGGCCCAGTCATCTTGGTGATCATGTCCGGTGGCCCGGTTGATGTCAAGTTTGCGGTAAACGACCCAAAGATCAGTGCCATTTTGTGGGTTGGTTATCCTGGTCAAGCCGGAGGAACTGCCATAGCTGACGTCATCTTTGGTCAAACAAACCCAGGAGGAAGATTACCCATGACATGGTACCCTGAAGGGTATCTGTCTAAGGTACCCATGACAATCATGGACATGCGTCCGAACCCAGCAACAGGGTACCCAGGAAGAACCTACAGATTCTACAAAGGGCCTGTGGTGTTCCCATTCGGACATGGATTAGGTTACTCAAGGTTCAGCCACAGCTTAGCCATGGCTCCAAAAGAGGTGTCGGTGCCCTTAGCCACTCTCCGAGCGTTGACAAACTCAAGCCTTTCGAGCGAAGCAGTGAGGGTGAGCCACGCCATTTGTGATGAAACATCGGAGATGGAATTCCACGTGGACGTGAAAAACGAAGGCTCCATGGATGGCACCCACACCCTTCTCGTATTCTCGAAACCACCACCTGGGAAATGGTCTCAGATCAAACAACTGGTGAACTTTGAGAAGACCCATGTTCCTGCCGGGTCGAAACAGCGTGTGAAGGTTGGTGTTCATGTCTGCAAACACTTGTCCGTCGTGGACCAGTTCGGGATTCGAAGAATCCCATCTGGTCAACATGAACTCCACATTGGTGATCTCAAGCATTCTATTTCTGTCCAAACTGTGCAACAGATTAAGAACTGA 2328 0.5399 MASQNHKKLLPILLVLLCVALSFPRPTQGRVPFACDPSNGLTRGFKFCNTHVPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATMFPQVITTAASFNQSLWRQIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVQGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLEDTYDVPFKACVLEGHVASVMCSYNQVNGKPTCADPDLLRNTIRGQWGLNGYIVSDCDSVGVFYDNQHYTRTPEEAAAEAIKAGLDLDCGPFLAIHTDAAIRKGLISENDLNLALANLITVQMRLGMFDGEPSAQPYGNLGPRDVCTPAHQNLALQAARESIVLLQNKRNSLPLSPARIRTVGVIGPNSDATVTMIGNYAGVACGYTSPLQGIARYVKTSHQVGCRNVACRGNELFGAAETVAKQVDATVLVMGLDQSIEAETRDRLGLLLPGLQQELVARVARAARGPVILVIMSGGPVDVKFAVNDPKISAILWVGYPGQAGGTAIADVIFGQTNPGGRLPMTWYPEGYLSKVPMTIMDMRPNPATGYPGRTYRFYKGPVVFPFGHGLGYSRFSHSLAMAPKEVSVPLATLRALTNSSLSSEAVRVSHAICDETSEMEFHVDVKNEGSMDGTHTLLVFSKPPPGKWSQIKQLVNFEKTHVPAGSKQRVKVGVHVCKHLSVVDQFGIRRIPSGQHELHIGDLKHSISVQTVQQIKN 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00101 775 FunFam probable beta-D-xylosidase 7 57 372 - -
Viun9g00101 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 400 630 IPR002772 GO:0004553|GO:0005975
Viun9g00101 775 Gene3D - 386 631 IPR036881 GO:0004553|GO:0005975
Viun9g00101 775 Gene3D Immunoglobulins 655 774 IPR013783 -
Viun9g00101 775 SMART Fn3_like_2 693 762 IPR026891 -
Viun9g00101 775 Gene3D - 57 374 IPR036962 GO:0004553|GO:0005975
Viun9g00101 775 Pfam Fibronectin type III-like domain 696 760 IPR026891 -
Viun9g00101 775 PANTHER SUGAR HYDROLASE-RELATED 22 765 IPR044993 GO:0009044|GO:0045493
Viun9g00101 775 SUPERFAMILY (Trans)glycosidases 46 399 IPR017853 -
Viun9g00101 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 400 633 IPR036881 GO:0004553|GO:0005975
Viun9g00101 775 Pfam Glycosyl hydrolase family 3 N terminal domain 112 329 IPR001764 GO:0004553|GO:0005975
Viun9g00101 775 PRINTS Glycosyl hydrolase family 3 signature 280 298 IPR001764 GO:0004553|GO:0005975
Viun9g00101 775 PRINTS Glycosyl hydrolase family 3 signature 206 222 IPR001764 GO:0004553|GO:0005975
Viun9g00101 775 PRINTS Glycosyl hydrolase family 3 signature 118 137 IPR001764 GO:0004553|GO:0005975
Viun9g00101 775 FunFam probable beta-D-xylosidase 2 385 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00101 Viun-Chr9 618020 623800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00101 7 768 Glycoside Hydrolase AT5G49360 72.135 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00101 - - gmx:100812823 1406.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00101 9 618020 623800 Viun9g00101 9 618020 623800 ECH