Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00100 ATGAACCCAACATGGGTTTTTGTGGTGAGTGTTGCAGCCATGTTGGTTGTTGTTGCGAATGGACAATCGTCGGTGAAGCCATTGGTGAAGACGGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCTTATTGCTGCAACGATACCATCTCTGACTACTTTCAGACCTATCAGTTTGAGAACCTCTTTGCAAAGCGCAATTCGCCGGTGGCACACGCTGTTGGATTCTGGGACTACCGTTCTTTCATCACTGCTGCAGCACAGTATCAGCCCAATGGCTTTGGCACCACCGGAGGAACCACCAGTGGCCAGAAGGAGGTTGCCGCTTTCCTCGGCCATGTCGGTAGCAAAACCTCTTGTGGTTACGGGGTGGCTACTGGGGGACCCTTGGCCTGGGGTTTATGCTACAACAAAGAATTGAGTCCTGATAAATTCTACTGCGACGAGTACTACAAATTGACCTACCCATGCACTCCTGGTGCAGCATACTACGGTCGTGGTGCAATCCCACTTTACTGGAACTACAACTACGGAAAAGCTGGGGAAGCCCTGAAGGTGGATCTGCTGAACCATCCAGAATACATAGAACAAAATGCAACCCTAGCGTTTCAGGCTGCGCTGTGGCAGTGGATGACCCCACCGGAGAAGCACCTACCTTCACCCCACGATGTGTTTGTTGGGAATTGGAAACCCACCAAGAACGATACTTTGTCCAAAAGGGTACCTGGGTTTGGTGCCACAATAAATTTACTCTACGGGGACCAAACCTGTGGGCAGGGACCTGATAATGAGGCCATGAACAACATCATTTCTCACTATCTTTATTACCTTGATCTCATGGGTGTTGGCAGAGAAGAGGCAGGGCCTAATGAAGTTCTCTCCTGTGCTGAACAAAAGGCTTTTAAGCCCTCTGGTTCACCATCTTCTGCCACAAATTGA 957 0.5005 MNPTWVFVVSVAAMLVVVANGQSSVKPLVKTVKGKKVCDKGWECKGWSAYCCNDTISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAAQYQPNGFGTTGGTTSGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKFYCDEYYKLTYPCTPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAALWQWMTPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGPDNEAMNNIISHYLYYLDLMGVGREEAGPNEVLSCAEQKAFKPSGSPSSATN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00100 318 PIRSF Endochitinase 1 308 IPR016283 GO:0004568|GO:0005975
Viun9g00100 318 FunFam Endochitinase (Chitinase) 143 203 - -
Viun9g00100 318 PANTHER CHITINASE-RELATED 9 305 - -
Viun9g00100 318 Gene3D Endochitinase, domain 2 144 203 - -
Viun9g00100 318 CDD chitinase_GH19 64 301 - -
Viun9g00100 318 SUPERFAMILY Lysozyme-like 56 307 IPR023346 -
Viun9g00100 318 Gene3D - 64 307 - -
Viun9g00100 318 Pfam Chitinase class I 64 291 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00100 Viun-Chr9 605413 607528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00100 23 307 Glycoside Hydrolase AT3G16920 81.404 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00100 - - vra:106760177 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00100 9 605413 607528 Viun9g00100 9 605413 607528 ECH