Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g00080 ATGGCCTCTCACTTCCCCAGAAACCAGAGCTTCTCATTTGCTGCTTTTCTTCTTCTTTTTCAACTTTTGACAGTGAACATTATCACTGCAGAAGCTCAAATCGGTGTGTGTTATGGCATGATGGGGAACAATCTACCACCAGCTAATGAAGTTATAAGTCTTTACAGATCAAATAACATAAGAAGAATGAGACTTTATGATCCTAATCAAGCTGCTCTACAAGCCCTAAGAAATTCAGGCATTGAACTCATTCTTGGAGTGCCAAACCCTGACCTTCAAGCTCTTGCCACAAATGCTGATAATGCTCGTCATTGGGTGCAAAGGAACGTCTTCAACTTTTGGCCAAGTGTTAGAATCAAGTACATAGCAGTTGGCAATGAAGTGAATCCTGTCGGAGGCTCCTCTTCGTATGCACAGTTTGTTCTACCTGCTGTCCAAAATGTGTACCAAGCTATAAGGGCTCAAGGTCTTCATGATCAAATCAAGGTTTCAACAGCTATTGACACGACCATGATAGGAAACTCTTACCCTCCATCACAAGGTTCCTTCAGAGGTGATGTTAGATCATACTTAGACCCTATAATAGGGTACTTGCTCTATGCAGGTGCACCTTTATTGGTCAATGTATATCCTTATTTTTCTTACTCTGGTAACCCTCGTGACATATCACTTCCCTATGCTCTTTTTAGTGCACCGAATGTTGTGGTGTGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATATTGGATGCAGTGCATGCAGCCATTGATAATACTAGGATCGGTTATGTTGAGGTTGTTGTGTCCGAGAGTGGGTGGCCCTCGGATGGAGGATTTGGTGCCACATACGAAAATGCACATGTGTATTTGGATAATTTGGTTCGTCGTGCTGGTAGAGGAAGTCCTAGAAGACCTTCAAAACCTACAGAGATTTATATATTTGGCATGTTCGATGAGAATGGAAAGAGTCCGGAGATAGAGAAACATTTTGGACTCTTTAATCCCAACAAACAAAAGAAGTACCCCTTTGGATTTGGTGGCAAAAGAGATGGGAAGATCGTTATTGATGACTTCAATGCAACAAATTCTCTTAAGAGTGACATGTAA 1113 0.4151 MASHFPRNQSFSFAAFLLLFQLLTVNIITAEAQIGVCYGMMGNNLPPANEVISLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNPDLQALATNADNARHWVQRNVFNFWPSVRIKYIAVGNEVNPVGGSSSYAQFVLPAVQNVYQAIRAQGLHDQIKVSTAIDTTMIGNSYPPSQGSFRGDVRSYLDPIIGYLLYAGAPLLVNVYPYFSYSGNPRDISLPYALFSAPNVVVWDGQYGYQNLFDAILDAVHAAIDNTRIGYVEVVVSESGWPSDGGFGATYENAHVYLDNLVRRAGRGSPRRPSKPTEIYIFGMFDENGKSPEIEKHFGLFNPNKQKKYPFGFGGKRDGKIVIDDFNATNSLKSDM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g00080 370 Gene3D Glycosidases 33 348 - -
Viun9g00080 370 FunFam glucan endo-1,3-beta-glucosidase, basic 34 347 - -
Viun9g00080 370 SUPERFAMILY (Trans)glycosidases 34 346 IPR017853 -
Viun9g00080 370 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Viun9g00080 370 Pfam Glycosyl hydrolases family 17 34 345 IPR000490 GO:0004553|GO:0005975
Viun9g00080 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 346 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g00080 Viun-Chr9 479670 482553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g00080 40 356 Glycoside Hydrolase AT4G16260 61.129 8.99e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g00080 - - ccaj:109791097 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g00080 9 479670 482553 Viun9g00080 9 479670 482553 ECH