Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03109 ATGAAGAACCTTCTCTTACTTTTTCCCTTTCTCTTTCTCCTCCTCTCCTCCGCCGTCAACGGCGCTCACAACATCACGCACATCCTCGAGAAACACCCAGGCTTCTCCACCTTCAACCACTACCTCACCGTCACGCACCTCGCCGACGAGATAAACCGCCGCCAGACCATCACCGTGCTCGCCATCGACAATGGCGCCATGAACACCCTCCTAGACAAGCACCTCACCCTCCCCACCCTCAAAAACGTCCTCTCCCTCCACGTCCTCGTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCAACAACAGCACCACCCTCGTCTCCTCCATGTTCCAGGCCACCGGGGCAGCCGCCGGCACCTCCGGCTACGTCAACATCACCAACCTCAAGGGCGGCAAGGTGGGCTTCGCCGCAGAGGACAACGACGGCGCCCTCCACTCCTTCTTCGTCAAGTCCCTCCAAGAATTCCCCTACTACATCTCCGTCCTCCAAATCAGCAACCCCATCAGCTCCGCCGACGCCGAAGCCCCCACCGCCGCGCCCTCCGCCATCGACCTCATCTCAATTATGTCCAAACAAGGCTGCAAGGCCTTCGCCGACATTCTCAGAGGCTCCAAAGCGCTCCCGGCTTTCCAAGAAAGCATCGACGGCGGGTTAACGGTTTTCTGCCCCACCGACAGCGCCGTCAACGGCTTCGCCCCCAAGTACAAGAACCTCACCGACTCTCAAAAAGTTTCCCTCTTGCTGTACCACGGCGTTCCCCTTTACGAGTCCCTTCAGATGCTCAAGTCCGGCAACGGCCCCATGAACACCCTCGCCACCGAGGGAGCCAACAAGTACGATTTCACCGTCCAGACCGAGGGCGAAGACGTGAGTCTGAAAACCAAGGTCAACACCGTCAGCATCATCGGCACGCTCATAGATCAAGACCCCTTCGTCGCCTACAAGATCAACAAGGTCTTGATGCCCAGAGAGTTGTTCAAGGCCTCCGACGTCGTCGACGACGCACCCGCCGAGTCACCAAAGCCTGCCAAGAAGAAGGGCAAGAAGGGAGCGCAAGATTCCACCGCCGCCGATGCTCCCGCCGACGGACCCTCGTCGGAATCCGACGATCAGAAAGCCGCCGATGAAGACAGCAACAATGGGGTAAGTTTGTTGCACGGCGGCGTAAGATTGGTGTCGGCGGCGCTGTTCTGTGTTTCGGTTGGATTTTTGGTTCTATGA 1227 0.5844 MKNLLLLFPFLFLLLSSAVNGAHNITHILEKHPGFSTFNHYLTVTHLADEINRRQTITVLAIDNGAMNTLLDKHLTLPTLKNVLSLHVLVDYFGAKKLHQINNSTTLVSSMFQATGAAAGTSGYVNITNLKGGKVGFAAEDNDGALHSFFVKSLQEFPYYISVLQISNPISSADAEAPTAAPSAIDLISIMSKQGCKAFADILRGSKALPAFQESIDGGLTVFCPTDSAVNGFAPKYKNLTDSQKVSLLLYHGVPLYESLQMLKSGNGPMNTLATEGANKYDFTVQTEGEDVSLKTKVNTVSIIGTLIDQDPFVAYKINKVLMPRELFKASDVVDDAPAESPKPAKKKGKKGAQDSTAADAPADGPSSESDDQKAADEDSNNGVSLLHGGVRLVSAALFCVSVGFLVL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03109 408 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 392 IPR033254 -
Viun8g03109 408 FunFam Fasciclin-like arabinogalactan protein 10 176 325 - -
Viun8g03109 408 Pfam Fasciclin domain 34 107 IPR000782 -
Viun8g03109 408 Pfam Fasciclin domain 196 324 IPR000782 -
Viun8g03109 408 MobiDBLite consensus disorder prediction 339 354 - -
Viun8g03109 408 SUPERFAMILY FAS1 domain 28 141 IPR036378 -
Viun8g03109 408 ProSiteProfiles FAS1/BIgH3 domain profile. 183 322 IPR000782 -
Viun8g03109 408 Gene3D FAS1 domain 187 324 IPR036378 -
Viun8g03109 408 Gene3D FAS1 domain 22 148 IPR036378 -
Viun8g03109 408 SMART fasc_3 221 325 IPR000782 -
Viun8g03109 408 ProSiteProfiles FAS1/BIgH3 domain profile. 22 189 IPR000782 -
Viun8g03109 408 MobiDBLite consensus disorder prediction 334 382 - -
Viun8g03109 408 FunFam Fasciclin-like arabinogalactan protein 2 21 163 - -
Viun8g03109 408 SUPERFAMILY FAS1 domain 181 325 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03109 Viun-Chr8 37916836 37918519 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03109 - - gmx:100805178 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03109 8 37916836 37918519 Viun8g03109 8 37916836 37918519 ECH