Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03062 ATGCACAGACTCTCCACCACTGCTCGCTCATCATCCGTCTCCGCCTTGTTGCGCTATGGCGGCGCACTTCGAAGGGACGTGCTTGCTCCCATTTCCTCTTCTCATTTAACTAAGGTCGGCGAGAAGGACAGCCAAGCTAGATGGTTTTCTATTCTGGGCTCGGACAAATCCAGCACAATTGAATCTGCAAATCATCCGAACCTGAGAAAAGATTTGTTCTTGGGTAGACGATGTGAATCAACTGCTGCAGAATCTTCTGCTTCTAGTTCCCCTCCAGCCGAGAGATATGAATACCAAGCTGAGGTTAGTCGGCTCATGGACCTCATTGTTAACAGTTTATACAGTAACAAAGAAGTGTTTCTTAGGGAGCTTATAAGCAATGCAAGTGATGCTTTGGATAAGCTGCGGTTTCTGAGTGTAACAGAACCTGGACTGTTGAAGGAGGAAGTTGATTTTGATATCCGAATTCAAACTGATAAGGATAATGGGATCATATCTATTACTGATACAGGCATTGGTATGACTAGGCAAGAGCTAGTTGATTGCCTTGGAACTATTGCTCAAAGTGGAACTGCAAAGTTTTTGAAGGCTTTAAAGGATAGCAAGGATGCTGGTGGTGACAACAATTTAATTGGTCAATTCGGTGTGGGATTTTATTCAGCTTTCCTGGTTTCTGATCGGGTTGTTGTCTCAACAAAGAGTCCAAAATCTGATAAGCAATATGTTTGGGAAGGAGAGGCAAATGCTAGCTCATATACCATAACTGAGGAAACAGATCCTGAGAAGATGATTCCAAGAGGAACTCGTCTTACACTTTATCTCAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGGATTCAGAAGCTTGTGAAAAACTATTCACAATTTGTCTCGTTCCCAATATACACTTGGCAGGAAAAGGGATTCACCAAAGAAGTGGAAGTTGACGAGGATACAGACGAAGCTAAAAAGGATGGTCAAGATGAGAAGACTGAGAAAAAGAAGAAAACTAAAACTGTTGTCGAGAAGTACTGGGATTGGGAGCTGGAAAATGAGACCCAACCAATCTGGCTCCGTAATCCTAAAGAAGTCACTAAGGAGGAGTACAATGAATTCTACAAGAAAACTTTTAATGAATACTTGGAGCCATTAGCATCCTCACACTTTACCACAGAGGGTGAGGTAGAATTTAGATCTATACTTTTCGTTCCGGCCTTTGCTCCCTCAGGGAAGGATGACATAATCAATCCCAAGACCAAGAACATAAGACTTTTCGTGAAGAGAGTGTTCATTTCAGATGACTTTGACGGAGAACTGTTCCCTCGATACTTAAGCTTTGTCAAAGGTGTTGTTGACTCAAATGATCTCCCACTTAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAGCGTTTAGTTCGGAAAGCTTTTGACATGATTTTGGGAATATCCATGAGTGAGAACAGAGAGGACTATGAGAAGTTCTGGGAGAACTTTGGCAAACACTTGAAATTGGGTTGCATTGAAGACCGTGAGAATCACAAGCGTATTGCTCCATTGCTTCGCTTTTTCTCATCCCAAAGTGAAGAAGAACTGATTGGCTTAGATGAATATGTTGAGAACATGAAACCTGACCAAAAAGATATTTATTATATTGCTTCTGACAGTGTGACTAGTGCGAAGAACACACCTTTCCTGGAGAAACTTGCGGAGAAGGATCTTGAAGTGCTGTTTTTGATTGATCCAATAGATGAAGTTGCCATTCAAAACCTTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAAGAAGACTTGGATCTAGGCGATAAGAATGAGGAAAAGGAAAAAGAAATGAAGCAGGAATTTGGCCAAACATGTGACTGGATCAAGAAACGACTGGGAGATAAAGTCGCAAGTGTGCAAATTTCAAACCGACTTAGCTCTTCACCTTGTGTTCTGGTGTCTGGGAAATTCGGTTGGTCTGCAAACATGGAAAGGCTGATGAAGGCACAGAGTATGGGTGATGCATCCAGCTTGGAATTCATGAGGAGCAGAAGAGTGTTTGAGATCAACCCTGACCATGCCATTATCAGGAATTTGGATGCGGCATACAAAACAAATCCCGATGATGAAGATGCCCTCAGAGCTATCGATCTTTTGTATGATGCAGCCTTGGTTTCCAGTGGTTTTACGCCTGATAATCCAGCACAACTTGGAGGGAAGATATACGAGATGATGGGTATGGCTCTCACAGGTAAATGGTCGACAAATGATCAGTTCCAGTCCACTGTAACGCAGCCCCATATCCCAGAAACTGTAGAAGCTGAGGTTGTCGAACCTACTGAGGCTGGCGGTCAGAAGTGA 2391 0.4266 MHRLSTTARSSSVSALLRYGGALRRDVLAPISSSHLTKVGEKDSQARWFSILGSDKSSTIESANHPNLRKDLFLGRRCESTAAESSASSSPPAERYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPGLLKEEVDFDIRIQTDKDNGIISITDTGIGMTRQELVDCLGTIAQSGTAKFLKALKDSKDAGGDNNLIGQFGVGFYSAFLVSDRVVVSTKSPKSDKQYVWEGEANASSYTITEETDPEKMIPRGTRLTLYLKRDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGFTKEVEVDEDTDEAKKDGQDEKTEKKKKTKTVVEKYWDWELENETQPIWLRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILFVPAFAPSGKDDIINPKTKNIRLFVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENREDYEKFWENFGKHLKLGCIEDRENHKRIAPLLRFFSSQSEEELIGLDEYVENMKPDQKDIYYIASDSVTSAKNTPFLEKLAEKDLEVLFLIDPIDEVAIQNLKSYKEKNFVDISKEDLDLGDKNEEKEKEMKQEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKAQSMGDASSLEFMRSRRVFEINPDHAIIRNLDAAYKTNPDDEDALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALTGKWSTNDQFQSTVTQPHIPETVEAEVVEPTEAGGQK 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03062 796 ProSitePatterns Heat shock hsp90 proteins family signature. 114 123 IPR019805 GO:0005524|GO:0006457|GO:0051082
Viun8g03062 796 CDD HATPase_Hsp90-like 103 298 IPR020575 -
Viun8g03062 796 Gene3D - 80 323 IPR036890 -
Viun8g03062 796 SUPERFAMILY HSP90 C-terminal domain 635 755 IPR037196 -
Viun8g03062 796 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 94 308 IPR036890 -
Viun8g03062 796 Gene3D - 525 611 - -
Viun8g03062 796 Gene3D - 612 759 IPR037196 -
Viun8g03062 796 Hamap Chaperone protein HtpG [htpG]. 91 756 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Viun8g03062 796 Gene3D - 352 524 - -
Viun8g03062 796 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 84 765 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Viun8g03062 796 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 116 276 IPR003594 -
Viun8g03062 796 Pfam Hsp90 protein 281 768 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 266 283 IPR020575 -
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 284 302 IPR020575 -
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 182 199 IPR020575 -
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 164 181 IPR020575 -
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 211 233 IPR020575 -
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 94 114 IPR020575 -
Viun8g03062 796 PRINTS 90kDa heat shock protein signature 115 137 IPR020575 -
Viun8g03062 796 FunFam Heat shock protein 90 alpha 612 760 - -
Viun8g03062 796 FunFam Heat shock protein 90 525 611 - -
Viun8g03062 796 SUPERFAMILY Ribosomal protein S5 domain 2-like 354 612 IPR020568 -
Viun8g03062 796 FunFam heat shock protein 90-5, chloroplastic 352 524 - -
Viun8g03062 796 PIRSF HSP90_HTPG 60 792 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Viun8g03062 796 FunFam heat shock protein 90-5, chloroplastic 81 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03062 Viun-Chr8 37696308 37701958 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03062 K09487 - gmx:100794913 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03062 8 37696308 37701958 Viun8g03062 8 37696308 37701958 ECH